More stable algorithm to calculate zeros of spherical hankel function

Follow up on #71:
Based on the publication of @narahahn and @spors.
This is basically a port of a scipy routine.
@narahahn: Could you try out some parametrisation and check, if it is working as expected?

@hagenw: Is it okay to remove the other methods?

The old version of the function returned z and p both as column vectors. Your new implementation returns z as row vector and p as column vector. Is this desired or a bug?
If the new method works better than the old ones, I see no big deal in replacing them as all our methods we implemented so far were buggy.

Is the code ready for me to have a look at it?
It would be cool if you could add a test function for this, maybe doing something like the figures in #57 for example those two or Figure 3 in @narahahn publication

It is ready. I will add a test function.

The test function seems to work ok under Octave, but I had to disable the legend as it covered the whole figure. I guess you have split it to six different subplots in order to not have to many overlapping points, or are the subplots showing different things?
For me they looked very similar, here is the first one of them, I guess this is the desired result?

I was looking to update the reference as the Campos and Calderón paper was published in 2012, see http://doi.org/10.1155/2012/873078
The problem is that they reformulated some of their equations and I was not able to fit them easily to the ones in https://arxiv.org/pdf/1105.0957.pdf, which should be the paper you referenced. Could you have a look at it and propose if we should stay with the arxiv version or switch to the other one?
I would then do the update to the comments.
I'm also wondering if we should add a link to the scipy routine as you used it as a template.
Otherwise, I'm really happy that this seems to be finally solved as it bothered me since the first version that included NFC-HOA.

I was looking to update the reference as the Campos and Calderón paper was published in 2012, see http://doi.org/10.1155/2012/873078
The problem is that they reformulated some of their equations and I was not able to fit them easily to the ones in https://arxiv.org/pdf/1105.0957.pdf, which should be the paper you referenced. Could you have a look at it and propose if we should stay with the arxiv version or switch to the other one?
I would then do the update to the comments.

Yes, I also had a look at the journal paper, which covers a more generalised problem and is harder to understand. I would stay with arxiv version since the formulas in the campos_zeros correspond directly to equations in the paper.

I'm also wondering if we should add a link to the scipy routine as you used it as a template.

Yes, that's a good idea.

Ok, I updated the references accordingly.
For the test function, could you maybe send me a screen shot of the Matlab result, that I can try to get the same with Octave.

I added a numerical test case as well for the order 1, 10, and 100 comparing to the results from the python code. This is not perfect as the outcome depends on the ordering of the zeros in the resulting vector, which can differ for different calculation methods, but I thought it is still better than nothing.

I also did a NFC-HOA calculation in order to compare with Hahn and Spors (2017) Fig. 8:
conf = SFS_config;
conf.nfchoa.order = 30;
sound_field_imp_nfchoa([-2 2],[-2 2],0,[1.5 1.5 0],'ps',1/conf.c,conf)

conf.nfchoa.order = 120;
sound_field_imp_nfchoa([-2 2],[-2 2],0,[1.5 1.5 0],'ps',1/conf.c,conf)

It looks very similar, but we have the different of that prominent circular contribution which is not part of the plot in the paper. If I remember correctly we had that discussion already somewhere else, hadn't we?
Is this due to the inclusion/exclusion of the lowest order?

For the test function, could you maybe send me a screen shot of the Matlab result, that I can try to get the same with Octave.

I am pretty sure, that the coloring is not relevant, but I will explicitly define the colors in the script and send you a screen shot.

Is this due to the inclusion/exclusion of the lowest order?
What are you referring to? What is the lowest order? What is included/excluded?

The plot under MATLAB R2015a:

The colors in the plot work now also under Octave, but the legend was still far to big. I added a commit that replaces the legend with an updated title, indicating the shown orders for every plot.

Coming back to the computed figure and the comparison to Hahn and Spors (2017) Fig. 8. Forget what I have set about the order. But do you have an idea why we have the obvious difference between those plots (of course besides the difference in amplitude)?

Are you using normalisation for the plot? Also the range of the colormap in  Hahn and Spors (2017) Fig. 8. is [-2,2].

I'm using normalisation, otherwise there is no energy in the plot. But you can do the following to get a very similar energy as in Hahn and Spors (2017) Fig. 8:
conf = SFS_config;
conf.nfchoa.order = 30;
conf.plot.caxis = [-0.3 0.3];
sound_field_imp_nfchoa([-2 2],[-2 2],0,[1.5 1.5 0],'ps',1/conf.c,conf)

will result in

This looks similar, but still we have a more pronounced visible circle as indicated by the arrow in the figure.

Was #56 the discussion you meant?

Is it possible, that you have chosen a different number of loudspeakers? In the paper, 60 has been chosen.
For 64 loudspeaker, one loudspeaker is exactly at 45 degrees, which looks like the virtual point source direction. For 60 loudspeakers, 45 degrees lies between two loudspeakers. Maybe this is the reason.

Ah, brilliant, that's it:
conf = SFS_config;
conf.nfchoa.order = 30;
conf.secondary_sources.number = 60;
conf.plot.caxis = [-0.3 0.3];
sound_field_imp_nfchoa([-2 2],[-2 2],0,[1.5 1.5 0],'ps',1/conf.c,conf)

and we will get the same result as in the paper.

I would say this is then nearly ready. There is only this discussion on the Bessel polynomial left, @narahahn should give his go, and after a small commit clean up we could merge.

I made another test and tried to improve Fig. 3.14 from my thesis and it worked quite well.
Original NFC-HOA part of the figure:

New NFC-HOA part of the figure as calculated with this branch:

@fietew: From my side, I have no further change requests for this branch and would like to start cleaning the commit history up, if you agree.

I agree.


Prefetch refinement

Is your feature request related to a problem? Please describe.
Currently, prefetch waits for load function to complete before rendering a new page. On a slow network, on mobile and in case of a long running requests in load this results in a less than optimal experience: the page freezes without any visual indication that the page is in fact loading.
Describe the solution you'd like
Allow to proceed with the page navigation if load function takes too much time to complete. Developers then are expected to give a user a visual feedback of the loading state on the new route by implementing loading spinners or by other means like in a traditional SPAs.
"Too much time to complete" is a configured timeout from a related onClick event.
How important is this feature to you?
Vital.

Just found $navigating which solves the same problem


CSReqServlet class extending javax.servlet.HttpServlet custom transaction

Describe the bug
I would like to receive url path instead of CSReqServlet#get or CSReqServlet#post
To Reproduce
Steps to reproduce the behavior:

Use this config websphere-liberty and apm-java-agent

Expected behavior
Transaction name is url path
Screenshot

Can the use_path_as_transaction_name configuration option work for you?

@eyalkoren  I worked . I have another problem here . Almost of my path_url is fixed by framework , for example: Request . Can I use some get/ post parameters as transaction name ?

You can do so by setting a custom transaction name via the API: https://www.elastic.co/guide/en/apm/agent/java/current/public-api.html#api-set-name

I don't want to change my current code . java-agent is better option . look like I have to build my customer agent right ?


Add Gradienty to CSS Generators

Gradienty is an all-in-one toolkit for CSS & TailwindCSS developers. It has everything, from Glassmorphism, Animations, Text Gradients, Mesh Gradients, Box Shadow Gradients, Background Gradients to 16,000+ Color Palettes & even a Blob Generator.
Link: https://gradienty.codes/

@VenoM9078 Please read the contributions guide before submitting a PR. Thanks!


feat: windowing syntax and inclusivity behavior

Summary
The inclusivity bounds of windows are generally confusing, and in some cases can be considered incorrect. The current behavior is that we will "update, emit, reset" windows. This means:

If a new input occurs at the window time, update that value.
Emit that value at the window time. (For hourly(), this is at "01:00:00, 02:00:00, 03:00:00", etc)
Reset the window to null.

This behavior is [exclusive, inclusive}.
Is your feature request related to a problem? Please describe.
The first problem we see with the above behavior is that values that occur in the next window are being included in the previous window. Looking at the attached dataset, we see that at times 2023-01-01, we have two rows for Ben with amounts 12 and NaN. The first row is an input row, the second row is the tick. The weirdness lies in that the sum_amount value for the tick includes the 12, but the tick was for the window from 2022-12-01 - 2023-01-01.
Use Case
We want to make windowing syntax and behavior intuitive. A user should be able to predict what values are produced.
Describe the solution you'd like
Design/propose solutions.
Ideas:

cumulative vs. non-cumulative windows

Describe alternatives you've considered
...

Elaborating a bit -- there seem to be two use cases:

I want the complete result of a windowed aggregate, once per window
I want the cumulative result so far within a window, resetting when a new window starts

And these seem to have contradictory requirements.

Adding bug, because we don't emit the current value when it changes on window reset (to null)

I think we had a reason why we said it was the correct value...
Wanted to add that this can be "hacked" for now:
sum(e, window=since(p))
count(e, window=since(p))

Can become:
sum(e, window=since(p)) | if(p)
count(e, window=since(p)) | if(p) | else(0)

I think we chose this behavior because there was no other way to produce "daily emitting at end of window" style aggregations. I guess it's true that we can hack this behavior, but IMO the current behavior still violates the expectation that the "historical" output describes the state of the computation at all points in time.

In notebooks, when wanting to emulate the behavior I want, I have previously used a filter to null out rows after the end:
For example, for count:
let page_views_since_purchase_raw = count(PageViews, window=since(is_valid(Purchases)))
let page_views_since_purchase = page_views_since_purchase_raw
      # Hack to work-around https://github.com/kaskada-ai/kaskada/issues/297
      | if({ predicate: is_valid(Purchases), input: is_valid($input)} | not($input.predicate | else(false)))
      | else(0)


Remove kotlin-test exclusion for protobuf

Codecov Report

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The diff coverage is n/a.

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=======================================
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  Branches      453      453
=======================================
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  Misses        446      446
  Partials      246      246

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dynamic js dependencies

Overview
Allow the config to support a list of dynamic dependencies for the js dependencies (needed to use plugins)
Details
No testing done yet. If this is a feature that you'd like to see, I'm happy to add some tests. It looks like adding plugins into the presentation is already supported, but I didn't see a way to include them in the js context.
Example config
title:      "some presentation"
author:     "Jay OConnor"
theme:      "sky"
js_dependencies:
  - src: 'plugin/mermaid/mermaid.js'

Hi @jdoconnor!
Thanks for the PR. I've been looking for an excuse to look into this.
To make sure we're on the same page, the end goal is to have a mermaid supported diagram in a slide, yes?
And so that means incorporating this plugin https://github.com/ludwick/reveal.js-mermaid-plugin so that it works with reveal-ck and allows a user (like yourself) to write something like:
graph LR;
  A(AAAA)==> B(B node);
  B==> C(SEE SEE);

  class A diag-a-styles;
  class B diag-b-styles
  class C diag-c-styles;

In a markdown file.
Presuming that's right, I'll take a look shortly.
If that's not right-- let me know.
Cheers,

yep.
In mermaid's case, there's another step of actually importing the mermaid js and css
(i happen to be writing in haml now, so ... something like)
%script{src: "https://cdnjs.cloudflare.com/ajax/libs/mermaid/7.0.0/mermaid.min.js"}
%link{rel: "stylesheet", href: "https://cdnjs.cloudflare.com/ajax/libs/mermaid/7.0.0/mermaid.min.css"}

%section.diagram-slide
  .diagram-display
  %span.diagram-data{style: "display: none;"}
    graph LR;
    A(AAAA)==> B(B node);
    B==> C(SEE SEE);

Got a chance to take a look.
Here's some existing behavior that gets us pretty far:
(No Change Needed) If you put a local copy of the mermaid.min.css into a directory named css/ it'll get copied into the generated presentation and <link rel="stylesheet" href="css/mermaid.min.css"> will be added to the  of your presentation.
(Change Needed) If you put a local copy of the mermaid.min.js into a directory named js/ it'll get copied into the generated presentation, but nothing is added to the . I think this should change so that it works similarly to CSS by adding  automatically.
(No Change Needed) If you put a local copy of the mermaid plugin into a directory like plugin/mermaid/mermaid.js then this is copied into the presentation with that same folder structure.
(Change Needed) Finally-- with your change that reads in the config.yml-- the plugin is added as a dependency. However, it seems like this should happen automatically to any plugin that's copied into the presentation.
With that said-- I've been able to wire up this plugin so that HTML that looks like this works:

    graph LR;
    A(AAAA)==> B(B node);
    B==> C(SEE SEE);

And looks like this: https://cl.ly/3O032l1v352t

Thanks for putting this together. very cool stuff

Thanks for the PR!
I included the commit you provided and then built on it to create https://github.com/jedcn/reveal-ck/pull/87.
I am going to merge that other PR and publish a new version of reveal-ck tonight.
I've verified that mermaid will work (when using haml) and I'll come back to this PR with explicit instructions for using mermaid.
Once I've put some instructions for mermaid here I'll close this PR.

Mermaid Setup Instructions
Hey so, here's what I've got for using mermaid.
Getting Started
My plan is to create some slides in a new directory from an open terminal:
mkdir /tmp/mermaid-slides && cd /tmp/mermaid-slides
Then I make sure I have reveal-ck version 3.8.0:
$ reveal-ck --version
reveal-ck version 3.8.0

Setting Up JS, CSS, and Plugin
Next I go here and read the instructions:
https://github.com/ludwick/reveal.js-mermaid-plugin
First up, I see that mermaid proper (https://knsv.github.io/mermaid/index.html) has its own JS and CSS, so we get a copy from the CDN and put in the js/ directory:
mkdir js
cd js
wget https://cdnjs.cloudflare.com/ajax/libs/mermaid/7.0.0/mermaid.min.js
cd ../

And do the same for css:
mkdir css
cd css
wget https://cdnjs.cloudflare.com/ajax/libs/mermaid/7.0.0/mermaid.min.css
cd ../

And then we get the reveal.js plugin directly from github and put it in plugin/mermaid/:
mkdir -p plugin/mermaid
cd plugin/mermaid
wget https://raw.githubusercontent.com/ludwick/reveal.js-mermaid-plugin/master/plugin/mermaid/mermaid.js
cd ../../

Now that you've downloaded these files, you should see this directory structure:
$ tree .
.
├── css
│   └── mermaid.min.css
├── js
│   └── mermaid.min.js
└── plugin
    └── mermaid
        └── mermaid.js

Writing Slides in HAML
With all of that setup, we create a file named slides.haml that contains the following:
%section
  I :heart: mermaid

%section.diagram-slide
  .diagram-display
  %span.diagram-data{ style: "display: none;" }
    graph LR;
    A(AAAA)==> B(B node);
    B==> C(SEE SEE);

%section
  I :blue_heart: mermaid

And then run reveal-ck generate.
Unfortunately, the styling between reveal.js and mermaid is unworkable with the default theme.
So I set it to sky by creating a config.yml file that contains:
theme: sky

Then I regenerate with reveal-ck generate and this is what I see:
this is what I see: https://cl.ly/2704351K1s0V
Writing Slides in Markdown
Some people prefer markdown, and, to date the only way I've seen to do this is to use bare HTML in a markdown file.
Pro-Tip: If you generate slides using a templating language (say, slides.haml) you can find the generated HTML in slides/slides.html. This lets you focus one exactly what got created, whereas slides/index.html contains everything needed to get reveal.js going.
Having seen what's in slides/slides.html, I copy-and-paste the mermaid part into the slides.md below.
In the end, I have the following into a markdown file:
# Slides that are mainly in markdown :metal:

---

    graph LR;
    A(AAAA)==> B(B node);
    B==> C(SEE SEE);

---

## And then more markdown so you can move like :zap:

And this is what I see: https://cl.ly/2v0k023r0X0y
What Next?
Hope this helps.
You should be able to instructions like these to get most reveal.js plugins going.
Let me know if you have any questions,
@jedcn

this is very sweet. will probably replace my local graphviz plugins.


Lint markdown files for broken links.

Ticket
Resolves #490
Changes

Add a lint make target for markdown files. Add a linter that checks for broken links.
Fix broken link in markdown files found by this linter.

Context for reviewers
PLEASE: double check the fixed links to ensure I found the right one. 🙂
This linter only checks broken links. There are other markdown linters we can consider adding should the need arise. This linter will be run when running the specific make command make infra-lint-markdown as well as the general lint command make infra-lint. Therefore, it will also be picked up as part of the CI pipeline which runs all the linters.
For the action, I largely copied the action used in GoogleChrome.
Testing
Before
Running locally before fixing the errors (snippet image)

And see the CI failing for just this new check before fixing the errors it finds:

Snippet of failing checks

After
Locally, make command completes without error when finding no issues.

All the beautiful checks in the CI for PRs pass! (Love those green checkmarks!)

(Not actually ready for review. Am trying to trigger CI pipeline to test that.)

(Not actually ready for review. Am trying to trigger CI pipeline to test that.)

Ready now! All checks are passing and docs fixed.


[FLINK-16975][documentation] Add docs for FileSystem connector

What is the purpose of the change
Add docs for the new file system connector
Brief change log

Add docs for the new file system connector
Remove old filesystem docs

Does this pull request potentially affect one of the following parts:

Dependencies (does it add or upgrade a dependency): no
The public API, i.e., is any changed class annotated with @Public(Evolving): no
The serializers: no
The runtime per-record code paths (performance sensitive): no
Anything that affects deployment or recovery: JobManager (and its components), Checkpointing, Kubernetes/Yarn/Mesos, ZooKeeper: no
The S3 file system connector: no

Documentation

Does this pull request introduce a new feature? no

Preview:

@sjwiesman Thank you very much for your review. Very useful. I will modify them.

@JingsongLi Thank you for working on this. I have one additional question that is not addressed in the docs. What happens when a record is supposed to be written into a partition that has already been committed. Is it dropped? written into its own file? What happens?

Late data processing can be "drop late date" or "continue appending". For now, just "continue appending". So the policy of partition commit needs to be idempotent.

Will solve https://issues.apache.org/jira/browse/FLINK-17925 first.

CC: @aljoscha @kl0u @twalthr

One more suggestion is to explain how to write streaming data into non-partitioned table. Is it supported? And how to config the properties for such use cases.

One more suggestion is to explain how to write streaming data into non-partitioned table. Is it supported? And how to config the properties for such use cases.

I'll add content.

Thanks everyone for review, merging...


Are Phrase lists removed from LUIS?

I used Phrase lists in LUIS in the past. However, the entry is not visible in the left menu anymore even though the documentation says it should be there.
Are Phrase lists removed from LUIS?
Please see the screenshot below:

Document Details
⚠ Do not edit this section. It is required for docs.microsoft.com ➟ GitHub issue linking.

ID: c975bacb-0bee-7bb7-0d22-1296e79364b4
Version Independent ID: 57f07a89-94d6-74ef-1ba3-846e590ac838
Content: Phrase lists - Language Understanding - Azure Cognitive Services
Content Source: articles/cognitive-services/LUIS/luis-how-to-add-features.md
Service: cognitive-services
GitHub Login: @diberry
Microsoft Alias: diberry

Also reported at https://stackoverflow.com/questions/54948089/are-phrase-lists-removed-from-luis

@hansmbakker Thanks for the feedback. We are investigating into the issue and will update you shortly.

@hansmbakker Could you please let us know which language you selected while creating the app?
It looks like for some of the languages the phrase lists tab is not shown.

Dutch

Here are the supported languages for phrase lists. Dutch does not seem to display this feature, Here is a screen shot from the app created for English language.

Could you please confirm if the app you created earlier was Dutch or English?

The app where it works was English indeed. However it would be userfriendlier if the menu item would be gray with an explanation instead of it disappearing without explanation.

@hansmbakker Thanks for your feedback. We will pass this feedback to our engineering team to provide more information in documentation.
@diberry FYI.. Please consider adding a link to the list of supported languages for this feature in the documentation here for the first point.

@RohitMungi-MSFT @hansmbakker I believe Hans may have found a bug. The service team is looking at it. #in-progress

@hansmbakker The fix has been deployed by the service team and phrases lists work for me on dutch apps. Can you please verify this fix works for you as well?

I’m not at work anymore but from my phone I can now see the Phrase lists menu entry for LUIS apps with the Dutch language! So it looks like it is fixed, thank you for the fast resolution!

@RohitMungi-MSFT I believe there is a difference between “phrase list suggestions” and “phrase lists” - for Dutch phrase lists work now.

@diberry Thanks for getting this fixed quickly. I believe the phrase list feature is supported for all languages in luis, Could you please confirm if this is correct?
Does the "phrase suggestions" column in the supported languages page refer to active learning to review the endpoint utterances? If Yes, can we update the column name to active learning as this may be the appropriate name since we do not have a term "phrase suggestions" listed in the documentation?
@hansmbakker Thanks for your feedback and we are glad phrase lists work for you now.

@RohitMungi-MSFT
Phrase suggestions is part of the Phrase list UX. When you create a phrase list and then add items to it, you can use the phrase list recommendations to find more items to add, based on what you have already added.
Phrase suggestions is not related to active learning.
I'll see if I can modify the docs to make this clear.

Thanks @diberry for the clarification. I will go ahead and close this issue as phrase lists are now available for all languages.


Move public domains into the simplified project domain

Right now some structures are left out of the DDL export.

Are there any?  I see citext, but

moved citext out and replaced with CREATE COLLATION IF NOT EXISTS ignore_both_accent_and_case (provider = icu, deterministic = false, locale = 'und-u-ks-level1');


How can I remove whatwg-fetch from my project when I build production release?

Is this a bug report?
No
Did you try recovering your dependencies?
Yes
Which terms did you search for in User Guide?
Readme.md
Steps to Reproduce
$ npm run build
Version
"react-scripts": "^2.0.0-next.47d2d941",
Description
When I build my project with production , I found that the library ['whatwg-fetch', isomorphic-fetch'] be built on my project.
But I do not need it......... So how can I remove them from my project?

Gone in v2.


How is pace.js generated

Question

[ ] How is file resources/plugins/pace/pace.js generated to the public/assets/admin/js/core/pace.js ??

Anyone can help with this one ?


Initial type checking with mypy on CI and fixes

Add mypy CI integration. Python type annotations are no more than (typically incomplete or sometimes just plain wrong) documentation without a type checker.
On https://github.com/single-cell-data/TileDB-SingleCell/commit/689b0e28964a28f97c7c4128cc93b4e92a8483b9:
$ mypy .
...
Found 55 errors in 15 files (checked 43 source files)

On https://github.com/single-cell-data/TileDB-SingleCell/commit/973847d8331750afed87cf5d8033ead9e95267f2:
$ mypy .
src/tiledbsc/raw_group.py:53: error: Argument "parent" to "AssayMatrixGroup" has incompatible type "AnnotationDataFrame"; expected "Optional[TileDBGroup]"  [arg-type]
Found 1 error in 1 file (checked 43 source files)

This might be a legtimate bug, I wasn't sure of the correct fix so I left it out.
Note: These are almost the bare minimum checks and fixes; mypy has a --strict flag that does several stricter checks. As of this PR, mypy --strict yields an additional 200 errors under apis/python/src alone, (ideally) to be addressed in future PR(s).

This might be a legtimate bug, I wasn't sure of the correct fix so I left it out.

It is, bug venial -- the 'back link' from nodes to parents is used for (a) propagating soma_options etc, which are all the same, and (b) for indentation levels in verbose ingest.
I'll fix this.
Also @gsakkis maybe I can put up some mypy-fixes as additional commits on this PR -- ?

@gsakkis the force-push just now was my rebasing onto current main

@gsakkis with my last commit this is clean in CI.
I think we should merge this as-is, then address mypy --strict . on one or more subsequent PRs ...

@johnkerl I pushed one more small fix; the logger name used to be "tiledbsc.logging" instead of "tiledbsc".

I think we should merge this as-is, then address mypy --strict . on one or more subsequent PRs ...

Agreed :+1:


Rails 5.1 support

Trying to upgrade Rails to 5.1.0, getting:
  sassc-rails was resolved to 1.3.0, which depends on
      railties (>= 4.0.0)

Sorry, seemed another gem was causing the issue


Report packages which won't build itself

We have found 13 packages which won't build itself. This should be reported to bioconda

The packages is the following:

ac-diamond
dawg
dcmtk
heinz
livekraken
meraculous
openms
regtools
sailfish
tn93
verifybamid

ac-diamond:
g++ throws compile errors, here is an example
08:48:08 BIOCONDA INFO (ERR) In file included from run/../output/output_format.h:26:0,
08:48:08 BIOCONDA INFO (ERR)                  from run/../output/output_buffer.h:25,
08:48:08 BIOCONDA INFO (ERR)                  from run/../output/output_file.h:25,
08:48:08 BIOCONDA INFO (ERR)                  from run/../output/join_blocks.h:26,
08:48:08 BIOCONDA INFO (ERR)                  from run/master_thread.h:27,
08:48:08 BIOCONDA INFO (ERR)                  from main.cpp:26:
08:48:08 BIOCONDA INFO (ERR) run/../output/../basic/score_matrix.h:167:22: error: ‘constexpr’ needed for in-class initialization of static data member ‘const double score_matrix::LN_2’ of non-integral type [-fpermissive]

dawg:
g++ throws compile errors, here is an example:
08:56:20 BIOCONDA INFO (ERR) /home/per/.conda/envs/bioconda-ci/conda-bld/dawg_1569567287971/work/src/dawg.cpp:140:77: error: cannot convert ‘boost::logic::tribool’ to ‘bool’ in initialization
08:56:20 BIOCONDA INFO (ERR)   bool split  = arg.split || (indeterminate(arg.split) && glopts.output_split);

dcmtk:
Compile errors example:
09:01:31 BIOCONDA INFO (ERR) /home/per/.conda/envs/bioconda-ci/conda-bld/dcmtk_1569567599003/work/dcmsign/libsrc/sicertvf.cc:110:18: error: aggregate 'X509_STORE_CTX ctx' has incomplete type and cannot be defined
09:01:31 BIOCONDA INFO (ERR)    X509_STORE_CTX ctx;

heinz:
Cmake errors:
09:05:21 BIOCONDA INFO (ERR) cmake: /home/per/.conda/envs/bioconda-ci/conda-bld/heinz_1569567894628/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/../lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by cmake)
09:05:21 BIOCONDA INFO (ERR) cmake: /home/per/.conda/envs/bioconda-ci/conda-bld/heinz_1569567894628/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/../lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by cmake)
09:05:21 BIOCONDA INFO (ERR) cmake: /home/per/.conda/envs/bioconda-ci/conda-bld/heinz_1569567894628/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/../lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by cmake)
09:05:21 BIOCONDA INFO (ERR) cmake: /home/per/.conda/envs/bioconda-ci/conda-bld/heinz_1569567894628/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/../lib/libstdc++.so.6: version `GLIBCXX_3.4.22' not found (required by cmake)

livekraken:
Errors while resolving conda environment
09:11:55 BIOCONDA INFO (OUT)   Build:
09:11:55 BIOCONDA INFO (OUT) source activate  /home/per/.conda/envs/bioconda-ci/conda-bld/_build_env
09:11:55 BIOCONDA INFO (OUT)
09:11:55 BIOCONDA INFO (OUT)
09:11:55 BIOCONDA INFO (ERR) Traceback (most recent call last):
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda_build/environ.py", line 756, in get_install_actions
09:11:55 BIOCONDA INFO (ERR)     actions = install_actions(prefix, index, specs, force=True)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
09:11:55 BIOCONDA INFO (ERR)     return f(*args, **kwds)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/plan.py", line 473, in install_actions
09:11:55 BIOCONDA INFO (ERR)     txn = solver.solve_for_transaction(prune=prune, ignore_pinned=not pinned)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/core/solve.py", line 107, in solve_for_transaction
09:11:55 BIOCONDA INFO (ERR)     force_remove, force_reinstall)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/core/solve.py", line 145, in solve_for_diff
09:11:55 BIOCONDA INFO (ERR)     force_remove)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/core/solve.py", line 242, in solve_final_state
09:11:55 BIOCONDA INFO (ERR)     ssc = self._run_sat(ssc)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
09:11:55 BIOCONDA INFO (ERR)     return f(*args, **kwds)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/core/solve.py", line 510, in _run_sat
09:11:55 BIOCONDA INFO (ERR)     ssc.solution_precs = ssc.r.solve(tuple(final_environment_specs))
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
09:11:55 BIOCONDA INFO (ERR)     return f(*args, **kwds)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/resolve.py", line 1054, in solve
09:11:55 BIOCONDA INFO (ERR)     self.find_conflicts(specs)
09:11:55 BIOCONDA INFO (ERR)   File "/home/per/.conda/envs/bioconda-ci/lib/python3.6/site-packages/conda/resolve.py", line 316, in find_conflicts
09:11:55 BIOCONDA INFO (ERR)     raise UnsatisfiableError(bad_deps)
09:11:55 BIOCONDA INFO (ERR) conda.exceptions.UnsatisfiableError: The following specifications were found to be in conflict:
09:11:55 BIOCONDA INFO (ERR)   - argparse -> python=2.6 -> readline=6.2
09:11:55 BIOCONDA INFO (ERR)   - argparse -> python=2.6 -> sqlite=3.13
09:11:55 BIOCONDA INFO (ERR)   - argparse -> python=2.6 -> tk=8.5
09:11:55 BIOCONDA INFO (ERR)   - python[version='>=3.7,<3.8.0a0']
09:11:55 BIOCONDA INFO (ERR) Use "conda search <package> --info" to see the dependencies for each package.

meraculous:
Cmake error
09:17:42 BIOCONDA INFO (ERR) CMake Error at CMakeLists.txt:34 (message):
09:17:42 BIOCONDA INFO (ERR)   Unsupported gcc version.  CMake will exit.

openms:
CMake could not find all third party dependencies
09:25:20 BIOCONDA INFO (ERR) CMake Error at /home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/cmake/Qt5Gui/Qt5GuiConfigExtras.cmake:9 (message):
09:25:20 BIOCONDA INFO (ERR)   Failed to find "GL/gl.h" in
09:25:20 BIOCONDA INFO (ERR)   "/home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include;/home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/x86_64-conda_cos6-linux-gnu/sysroot/usr/include;/home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/x86_64-conda_cos6-linux-gnu/sysroot/usr/include/libdrm;/home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/x86_64-conda_cos6-linux-gnu/sysroot/usr/include".
09:25:20 BIOCONDA INFO (ERR) Call Stack (most recent call first):
09:25:20 BIOCONDA INFO (ERR)   /home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/cmake/Qt5Gui/Qt5GuiConfig.cmake:174 (include)
09:25:20 BIOCONDA INFO (ERR)   /home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/cmake/Qt5Widgets/Qt5WidgetsConfig.cmake:89 (find_package)
09:25:20 BIOCONDA INFO (ERR)   /home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/cmake/Qt5OpenGL/Qt5OpenGLConfig.cmake:89 (find_package)
09:25:20 BIOCONDA INFO (ERR)   /home/per/.conda/envs/bioconda-ci/conda-bld/openms_1569568874095/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/cmake/Qt5/Qt5Config.cmake:28 (find_package)
09:25:20 BIOCONDA INFO (ERR)   doc/code_examples/CMakeLists.txt:53 (find_package)
09:25:20 BIOCONDA INFO (ERR)
09:25:20 BIOCONDA INFO (ERR)
09:25:22 BIOCONDA INFO (OUT) --   - Fido not found
09:25:22 BIOCONDA INFO (OUT) --   - FidoChooseParameters not found
09:25:22 BIOCONDA INFO (OUT) --   - Sirius not found
09:25:22 BIOCONDA INFO (OUT) --   - Novor not found
09:25:22 BIOCONDA INFO (OUT) --   - Crux not found
09:25:22 BIOCONDA INFO (OUT) --   - SpectraST not found
09:25:22 BIOCONDA INFO (OUT) -- Documentation is built (-D ENABLE_DOCS=On).
09:25:22 BIOCONDA INFO (OUT) -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
09:25:22 BIOCONDA INFO (OUT) -- Doxygen not found. Disabling all documentation targets!
09:25:22 BIOCONDA INFO (OUT) -- Note that no documentation will be installed alongside OpenMS.
09:25:22 BIOCONDA INFO (OUT) -- Configuring incomplete, errors occurred!

regtools:
Probably a g++ compile error, a lot of warnings was thrown

sailfish:
Cmake error
09:38:08 BIOCONDA INFO (ERR) CMake Error at CMakeLists.txt:216 (message):
09:38:08 BIOCONDA INFO (ERR)   Sailfish cannot be compiled without Boost.

tn93
g++ compile errors, here is an example
09:43:01 BIOCONDA INFO (ERR) /home/per/.conda/envs/bioconda-ci/conda-bld/tn93_1569570147957/work/src/tn93_shared.cc:325:10: error: reference to 'empty' is ambiguous
09:43:01 BIOCONDA INFO (ERR)    return empty;
09:43:01 BIOCONDA INFO (ERR)           ^~~~~

verifybamid
Compile error
09:48:38 BIOCONDA INFO (ERR) Parameters.cpp:573:25: error: use of an operand of type ‘bool’ in ‘operator++’ is deprecated [-Werror=deprecated]
09:48:38 BIOCONDA INFO (ERR)              legacy_count++;
09:48:38 BIOCONDA INFO (ERR)                          ^~
09:48:39 BIOCONDA INFO (ERR) cc1plus: all warnings being treated as errors

Reported in https://github.com/bioconda/bioconda-utils/issues/614


pip install meshparty fails on M1 Mac, python3.8

Something is going wrong when trying to install meshparty. I'm still investigating, but I figured I'd start an issue for the usual reasons – in case someone else knows what's happening and can help me, in case this discussion helps identify a bug, or in case the process of me finding a solution helps someone in the future.
pip install meshparty fails on:

MacOS 12.6, M1 architecture
virtualenv with python3.8.15 (installed via brew) and pip 22.3.1

Note that I can get pip install meshparty to succeed if I use brew in x86_64 compatibility mode to install python3.7 via the command arch -x86_64 brew install<EMAIL_ADDRESS>and then make a virtualenv with that python. (If I try to install python3.7 without the arch -x86_64 prefix, brew errors out with<EMAIL_ADDRESS>The x86_64 architecture is required for this software. Error<EMAIL_ADDRESS>An unsatisfied requirement failed this build.") So the failure appears to be specific to either M1 architecture or python3.8.
Large wall of text below (sorry) showing the failed installs:
[23:34:19]Jaspers-MacBook-Pro-2020:~$ mkvirtualenv -p `which python3.8` meshparty
created virtual environment CPython3.8.15.final.0-64 in 166ms
  creator CPython3Posix(dest=/Users/jasper/.virtualenvs/meshparty, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/Users/jasper/Library/Application Support/virtualenv)
    added seed packages: pip==22.2.2, setuptools==65.3.0, wheel==0.37.1
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator
virtualenvwrapper.user_scripts creating /Users/jasper/.virtualenvs/meshparty/bin/predeactivate
virtualenvwrapper.user_scripts creating /Users/jasper/.virtualenvs/meshparty/bin/postdeactivate
virtualenvwrapper.user_scripts creating /Users/jasper/.virtualenvs/meshparty/bin/preactivate
virtualenvwrapper.user_scripts creating /Users/jasper/.virtualenvs/meshparty/bin/postactivate
virtualenvwrapper.user_scripts creating /Users/jasper/.virtualenvs/meshparty/bin/get_env_details
(meshparty) [23:34:39]Jaspers-MacBook-Pro-2020:~$ pip install --upgrade pip
Requirement already satisfied: pip in ./.virtualenvs/meshparty/lib/python3.8/site-packages (22.2.2)
Collecting pip
  Using cached pip-22.3.1-py3-none-any.whl (2.1 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 22.2.2
    Uninstalling pip-22.2.2:
      Successfully uninstalled pip-22.2.2
Successfully installed pip-22.3.1

(meshparty) [23:36:17]Jaspers-MacBook-Pro-2020:~$ pip install meshparty
Collecting meshparty
  Using cached meshparty-1.16.7.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
Collecting plyfile
  Using cached plyfile-0.7.4-py3-none-any.whl (39 kB)
Collecting h5py
  Using cached h5py-3.7.0-cp38-cp38-macosx_11_0_arm64.whl (2.6 MB)
Collecting numpy
  Using cached numpy-1.23.5-cp38-cp38-macosx_11_0_arm64.whl (13.3 MB)
Collecting scipy>=1.3.0
  Using cached scipy-1.9.3-cp38-cp38-macosx_12_0_arm64.whl (28.5 MB)
Collecting scikit-learn
  Using cached scikit_learn-1.1.3-cp38-cp38-macosx_12_0_arm64.whl (7.6 MB)
Collecting networkx
  Using cached networkx-2.8.8-py3-none-any.whl (2.0 MB)
Collecting multiwrapper
  Using cached multiwrapper-0.1.1.tar.gz (4.9 kB)
  Preparing metadata (setup.py) ... done
Collecting cloud-volume>=1.16.0
  Using cached cloud_volume-8.16.0-py3-none-any.whl (234 kB)
Collecting trimesh>=3.0.14
  Using cached trimesh-3.16.4-py3-none-any.whl (663 kB)
Collecting rtree
  Using cached Rtree-1.0.1-cp38-cp38-macosx_11_0_arm64.whl (814 kB)
Collecting pymeshfix>=0.12.3
  Using cached pymeshfix-0.16.1.tar.gz (1.5 MB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Preparing metadata (pyproject.toml) ... done
Collecting meshparty
  Using cached meshparty-1.16.6.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.5.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.4.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.3.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.2.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.1.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.0.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.15.0.tar.gz (114 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.14.0.tar.gz (109 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.13.2.tar.gz (109 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.13.1.tar.gz (107 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.12.0.tar.gz (108 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.11.0.tar.gz (107 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.10.2.tar.gz (107 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.10.1.tar.gz (107 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.10.0.tar.gz (105 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.8.0.tar.gz (64 kB)
  Preparing metadata (setup.py) ... done
Collecting sklearn
  Using cached sklearn-0.0.post1.tar.gz (3.6 kB)
  Preparing metadata (setup.py) ... done
Collecting cloud-volume==0.65.4
  Using cached cloud_volume-0.65.4-py2.py3-none-any.whl (178 kB)
Collecting pykdtree
  Using cached pykdtree-1.3.6.tar.gz (82 kB)
  Preparing metadata (setup.py) ... done
Collecting meshparty
  Using cached meshparty-1.7.2.tar.gz (62 kB)
  Preparing metadata (setup.py) ... done
Collecting cloud-volume==0.63
  Using cached cloud_volume-0.63.0-py2.py3-none-any.whl (173 kB)
Collecting meshparty
  Using cached meshparty-1.7.1.tar.gz (62 kB)
  Preparing metadata (setup.py) ... done
Collecting cloud-volume==0.62
  Using cached cloud_volume-0.62.0-py2.py3-none-any.whl (173 kB)
Collecting meshparty
  Using cached meshparty-1.7.0.tar.gz (62 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.6.0.tar.gz (380 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.5.0.tar.gz (382 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.4.3.tar.gz (39 kB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.4.1.tar.gz (56.5 MB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.4.0.tar.gz (56.5 MB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.3.0.tar.gz (56.5 MB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.2.0.tar.gz (56.5 MB)
  Preparing metadata (setup.py) ... done
  Using cached meshparty-0.3.4.tar.gz (26 kB)
  Preparing metadata (setup.py) ... done
Collecting pyassimp
  Using cached pyassimp-4.1.4.tar.gz (98 kB)
  Preparing metadata (setup.py) ... done
Collecting meshparty
  Using cached meshparty-0.2.4.tar.gz (21 kB)
  Preparing metadata (setup.py) ... error
  error: subprocess-exited-with-error

  × python setup.py egg_info did not run successfully.
  │ exit code: 1
  ╰─> [6 lines of output]
      Traceback (most recent call last):
        File "<string>", line 2, in <module>
        File "<pip-setuptools-caller>", line 34, in <module>
        File "/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-install-zxzp_qyr/meshparty_62ea7efe410c498f959d8668f73fc7e8/setup.py", line 23, in <module>
          with open('requirements.txt', 'r') as f:
      FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

Something is confusing pip and making it try to go fetch older versions of meshparty. The actual error at the end about not finding requirements.txt doesn't seem relevant since it's something only present in a really old meshparty. Not sure why pip is getting confused.
Now for an even larger wall of text by adding -v:
(meshparty) [23:34:51]Jaspers-MacBook-Pro-2020:~$ pip install meshparty -v
Using pip 22.3.1 from /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/pip (python 3.8)
Collecting meshparty
  Using cached meshparty-1.16.7.tar.gz (114 kB)
  Running command python setup.py egg_info
  ['plyfile', 'h5py', 'numpy', 'scipy>=1.3.0', 'scikit-learn', 'networkx', 'multiwrapper', 'cloud-volume>=1.16.0', 'trimesh>=3.0.14', 'rtree', 'pymeshfix>=0.12.3', 'vtk', 'shapely', 'imageio', 'pandas', 'orjson', 'blosc', 'numba', 'tables', 'dataclasses']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  listing git files failed - pretending there aren't any
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching 'LICENCE'
  warning: no files found matching 'README.md'
  no previously-included directories found matching 'test*'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-fxixd1w9/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
Collecting plyfile
  Using cached plyfile-0.7.4-py3-none-any.whl (39 kB)
Collecting h5py
  Using cached h5py-3.7.0-cp38-cp38-macosx_11_0_arm64.whl (2.6 MB)
Collecting numpy
  Using cached numpy-1.23.5-cp38-cp38-macosx_11_0_arm64.whl (13.3 MB)
Collecting scipy>=1.3.0
  Using cached scipy-1.9.3-cp38-cp38-macosx_12_0_arm64.whl (28.5 MB)
Collecting scikit-learn
  Using cached scikit_learn-1.1.3-cp38-cp38-macosx_12_0_arm64.whl (7.6 MB)
Collecting networkx
  Using cached networkx-2.8.8-py3-none-any.whl (2.0 MB)
Collecting multiwrapper
  Using cached multiwrapper-0.1.1.tar.gz (4.9 kB)
  Running command python setup.py egg_info
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/SOURCES.txt'
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-gjkte37_/multiwrapper.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  Preparing metadata (setup.py) ... done
Collecting cloud-volume>=1.16.0
  Using cached cloud_volume-8.16.0-py3-none-any.whl (234 kB)
Collecting trimesh>=3.0.14
  Using cached trimesh-3.16.4-py3-none-any.whl (663 kB)
Collecting rtree
  Using cached Rtree-1.0.1-cp38-cp38-macosx_11_0_arm64.whl (814 kB)
Collecting pymeshfix>=0.12.3
  Using cached pymeshfix-0.16.1.tar.gz (1.5 MB)
  Running command pip subprocess to install build dependencies
  Collecting setuptools>=40.6.0
    Using cached setuptools-65.6.3-py3-none-any.whl (1.2 MB)
  Collecting wheel
    Using cached wheel-0.38.4-py3-none-any.whl (36 kB)
  Collecting numpy
    Using cached numpy-1.23.5-cp38-cp38-macosx_11_0_arm64.whl (13.3 MB)
  Collecting cython
    Using cached Cython-0.29.32-py2.py3-none-any.whl (986 kB)
  Installing collected packages: wheel, setuptools, numpy, cython
  Successfully installed cython-0.29.32 numpy-1.23.5 setuptools-65.6.3 wheel-0.38.4
  Installing build dependencies ... done
  Running command Getting requirements to build wheel
  Getting requirements to build wheel ... done
  Running command Preparing metadata (pyproject.toml)
  running dist_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/SOURCES.txt'
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix.egg-info/SOURCES.txt'
  creating '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-modern-metadata-2a4k1tvc/pymeshfix-0.16.1.dist-info'
  Preparing metadata (pyproject.toml) ... done
Collecting meshparty
  Using cached meshparty-1.16.6.tar.gz (114 kB)
  Running command python setup.py egg_info
  ['plyfile', 'h5py', 'numpy', 'scipy>=1.3.0', 'scikit-learn', 'networkx', 'multiwrapper', 'cloud-volume>=1.16.0', 'trimesh>=3.0.14', 'rtree', 'pymeshfix>=0.12.3', 'vtk', 'shapely', 'imageio', 'pandas', 'orjson', 'blosc', 'numba', 'tables', 'dataclasses']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  listing git files failed - pretending there aren't any
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching 'LICENCE'
  warning: no files found matching 'README.md'
  no previously-included directories found matching 'test*'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-bjh083n1/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.5.tar.gz (114 kB)
  Running command python setup.py egg_info
  ['plyfile', 'h5py', 'numpy', 'scipy>=1.3.0', 'scikit-learn', 'networkx', 'multiwrapper', 'cloud-volume>=1.16.0', 'trimesh>=3.0.14', 'rtree', 'pymeshfix>=0.12.3', 'vtk', 'shapely', 'imageio', 'pandas', 'orjson', 'blosc', 'numba', 'tables', 'dataclasses']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  listing git files failed - pretending there aren't any
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching 'LICENCE'
  warning: no files found matching 'README.md'
  no previously-included directories found matching 'test*'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-139bwz9m/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.16.4.tar.gz (114 kB)
  Running command python setup.py egg_info
  ['plyfile', 'h5py', 'numpy', 'scipy>=1.3.0', 'scikit-learn', 'networkx', 'multiwrapper', 'cloud-volume>=1.16.0', 'trimesh>=3.0.14', 'rtree', 'pymeshfix>=0.12.3', 'vtk', 'shapely', 'imageio', 'pandas', 'orjson', 'blosc', 'numba', 'tables', 'dataclasses']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  listing git files failed - pretending there aren't any
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching 'LICENCE'
  warning: no files found matching 'README.md'
  no previously-included directories found matching 'test*'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-phv7zmnt/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done

...

  Using cached meshparty-1.3.0.tar.gz (56.5 MB)
  Running command python setup.py egg_info
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  ['plyfile', 'h5py', 'numpy', 'scipy>=1.3.0', 'sklearn', 'networkx', 'multiwrapper', 'trimesh', '-e git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume', 'pymeshfix>=0.12.3', 'pykdtree', 'vtk', 'pcst_fast', 'annotationframeworkclient>=0.2.0', 'pyembree', 'shapely', 'imageio']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  listing git files failed - pretending there aren't any
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching 'LICENCE'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5c77ufjc/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
  Using cached meshparty-1.2.0.tar.gz (56.5 MB)
  Running command python setup.py egg_info
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  ['plyfile', 'h5py', 'numpy', 'scipy>=1.3.0', 'sklearn', 'networkx', 'multiwrapper', 'trimesh', '-e git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume', 'pymeshfix>=0.12.3', 'pykdtree', 'vtk', 'pcst_fast', 'annotationframeworkclient>=0.2.0', 'pyembree', 'shapely', 'imageio']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/SOURCES.txt'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  listing git files failed - pretending there aren't any
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching 'LICENCE'
  adding license file 'LICENSE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-5f6qcadr/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
  Using cached meshparty-0.3.4.tar.gz (26 kB)
  Running command python setup.py egg_info
  WARNING: Cannot look at git URL git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume because it does not support lookup as web pages.
  ['plyfile', 'h5py', 'numpy', 'scipy', 'sklearn', 'networkx', 'multiwrapper', 'trimesh', '-e git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume', 'pyassimp', 'pymeshfix', 'pykdtree', 'vtk', 'pcst_fast']
  ['git+https://github.com/seung-lab/cloud-volume.git@graphene#egg=cloud-volume']
  ['plyfile', 'h5py', 'numpy', 'scipy', 'sklearn', 'networkx', 'multiwrapper', 'trimesh', 'pyassimp', 'pymeshfix', 'pykdtree', 'vtk', 'pcst_fast', 'cloud-volume']
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/dependency_links.txt
  writing requirements to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/requires.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/SOURCES.txt'
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  /Users/jasper/.virtualenvs/meshparty/lib/python3.8/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
    warnings.warn(
  warning: no files found matching 'LICENCE'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-0ubc1b7c/meshparty.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
Collecting pyassimp
  Using cached pyassimp-4.1.4.tar.gz (98 kB)
  Running command python setup.py egg_info
  running egg_info
  creating /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info
  writing /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info/PKG-INFO
  writing dependency_links to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info/dependency_links.txt
  writing top-level names to /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info/top_level.txt
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info/SOURCES.txt'
  reading manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info/SOURCES.txt'
  writing manifest file '/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-wx34awtm/pyassimp.egg-info/SOURCES.txt'
  Preparing metadata (setup.py) ... done
Collecting meshparty
  Using cached meshparty-0.2.4.tar.gz (21 kB)
  Running command python setup.py egg_info
  Traceback (most recent call last):
    File "<string>", line 2, in <module>
    File "<pip-setuptools-caller>", line 34, in <module>
    File "/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-install-v59rgb77/meshparty_4b1b2e92c50944199d19d460bbb403d7/setup.py", line 23, in <module>
      with open('requirements.txt', 'r') as f:
  FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
  error: subprocess-exited-with-error

  × python setup.py egg_info did not run successfully.
  │ exit code: 1
  ╰─> See above for output.

  note: This error originates from a subprocess, and is likely not a problem with pip.
  full command: /Users/jasper/.virtualenvs/meshparty/bin/python -c '
  exec(compile('"'"''"'"''"'"'
  # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
  #
  # - It imports setuptools before invoking setup.py, to enable projects that directly
  #   import from `distutils.core` to work with newer packaging standards.
  # - It provides a clear error message when setuptools is not installed.
  # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
  #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
  #     manifest_maker: standard file '"'"'-c'"'"' not found".
  # - It generates a shim setup.py, for handling setup.cfg-only projects.
  import os, sys, tokenize

  try:
      import setuptools
  except ImportError as error:
      print(
          "ERROR: Can not execute `setup.py` since setuptools is not available in "
          "the build environment.",
          file=sys.stderr,
      )
      sys.exit(1)

  __file__ = %r
  sys.argv[0] = __file__

  if os.path.exists(__file__):
      filename = __file__
      with tokenize.open(__file__) as f:
          setup_py_code = f.read()
  else:
      filename = "<auto-generated setuptools caller>"
      setup_py_code = "from setuptools import setup; setup()"

  exec(compile(setup_py_code, filename, "exec"))
  '"'"''"'"''"'"' % ('"'"'/private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-install-v59rgb77/meshparty_4b1b2e92c50944199d19d460bbb403d7/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-pip-egg-info-iuthd45d
  cwd: /private/var/folders/mc/s0ycgh_s5kx66_zjqj8gvb_w0000gn/T/pip-install-v59rgb77/meshparty_4b1b2e92c50944199d19d460bbb403d7/
  Preparing metadata (setup.py) ... error
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

I haven't had time to look through this output terribly closely, but at a glance, nothing jumps out at me.
Doing pip install numpy before pip install meshparty doesn't help. (I know some packages require this.)
Any ideas?

Thanks for the heads up — I was about to run down this path myself. I think that there are going to be a few places where M1 Macs have installation problems. Cloudvolume has a few issues in some of its requirements, for example, which we discussed here: https://github.com/seung-lab/cloud-volume/issues/570. I'm confused where it's using git+https for the cloudvolume download, though — the requirements don't have that (and it was a pretty narrow window a while ago when that was needed).
Will suggested (probably correctly) using a Rosetta-based terminal to do the intel emulation for a modest performance hit.

Okay, I just got it to install on my new M1 MacBook Pro running OS X 13.0.2, after first installing CloudVolume after going through the workarounds found in the link above and then installing pytables with Conda (conda install pytables), and then doing a pip install of the current master branch of meshparty.

what it looks like it is that its going back in time to older and older meshparty versions, and eventually finding a very early one where we forgot the requirements.txt file in the manifest.  I don't see why its rejecting all the newer versions of meshparty though.

Looks like this issue has its root in vtk. pip install vtk doesn't work on python3.8 M1, and vtk is a prerequisite for meshparty.
(fanc3.8) [22:09:30]Jaspers-MacBook-Pro-2020:~/Desktop$ pip install vtk
ERROR: Could not find a version that satisfies the requirement vtk (from versions: none)
ERROR: No matching distribution found for vtk

pip install vtk works in a python3.9 environment. Indeed the full pip install meshparty from a clean M1 python3.9 virtualenv almost works. For me, the only other prerequisite with a wrinkle was tables. (I didn't have to do any workarounds to get cloudvolume to install.) You installed tables through conda Casey, but the conda-free solution for me was brew install hdf5 and then HDF5_DIR=/opt/homebrew/opt/hdf5 pip install meshparty.
So, meshparty will not install on M1 architecture python3.8, unless users want to build vtk from source themselves. I tried building vtk and it crashed with some error that I decided wasn't worth my time to investigate.
There may also be other packages that prevent meshparty install from succeeding with M1 python3.8, but vtk is the first order issue and would need to be solved before seeing whether there are other issues after it.
For now, problem solved: use python3.9

thanks for documenting this Japser!

Agreed, thank you — I think this speaks to a need we’ve discussed before to
split out some of the functionality and in particular to make VTK an
optional install. It’s always been a more challenging requirement and
unnecessary for many applications.
On Sat, Dec 3, 2022 at 1:57 PM Forrest Collman @.***>
wrote:

thanks for documenting this Jasper!
—
Reply to this email directly, view it on GitHub
https://github.com/sdorkenw/MeshParty/issues/84#issuecomment-1336265491,
or unsubscribe
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UI - strata hotel CI/CD stuff

Issue:

bcgov/entity/issues/

Description of changes:
By submitting this pull request, I confirm that you can use, modify, copy, and redistribute this contribution, under the terms of the namex license (Apache 2.0).

Temporary Url for review: https://strr-strata-hotel-dev--pr-284-qxwet7ns.web.app


feat(python): IAST weak hash

Description
Update tests and docker projects to enable IAST weak hash for Python
Check list
Your PR is not ready to be reviewed? Please save it as a draft :pray:

[ ] Follows the style guidelines of this project (See how to easily lint the code)
[ ] CI is passing
[ ] There is at least one approval from code owners

Yes to all? Feel free to merge it whenever you want :heart:

python django and uwsgi build failed:
 File "/usr/local/lib/python3.9/importlib/__init__.py", line 127, in import_module     return _bootstrap._gcd_import(name[level:], package, level)   File "<frozen importlib._bootstrap>", line 1030, in _gcd_import   File "<frozen importlib._bootstrap>", line 1007, in _find_and_load   File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked   File "<frozen importlib._bootstrap>", line 680, in _load_unlocked   File "/usr/local/lib/python3.9/site-packages/ddtrace/internal/module.py", line 190, in _exec_module     self.loader.exec_module(module)   File "<frozen importlib._bootstrap_external>", line 850, in exec_module   File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed   File "/app/urls.py", line 6, in <module>     from iast import weak_hash, secure_algorithm ModuleNotFoundError: No module named 'iast' weblog exited with code 137

Hi @avara1986, is this PR not a draft anymore, can I review it ?

Hi @avara1986, is this PR not a draft anymore, can I review it ?

Yes @cbeauchesne , I updated to "ready to review" :smile:

For a reason I ignore, GH did not run action on the last commit. I manually ran them : https://github.com/DataDog/system-tests/actions/runs/3472503367


How to add custom options to the right-click menu of a specific question in the "Questions" section

How to add custom options to the right-click menu of a specific question in the "Questions" section.The options added by other plugins are shown in the picture.

You mean the Problems view.

You mean the Problems view.

yes

Those are quick fixes for the problems and are added via code actions API - https://github.com/microsoft/vscode/blob/069e8e50b0bc4b11b1830724cab037b2c7c67d34/src/vscode-dts/vscode.d.ts#L14201


Google Maps Flutter: LatLng longitude loses precision in constructor

Hi,
Thanks for your time in reading this bug.
The issue i am experiencing involves the LatLng class provided by the google_maps_flutter package. The constructor.for the LatLng class seems to be losing some precision on the given longitude.
The end result is that my map markers are in the wrong location with an error of 2-10m
Steps to Reproduce
I am running my flutter application on a physical iPhone 7 with iOS 13.7.
Expected results:
When giving the marker object the coordinates: (lat: -34.509981, long: 150.792384)
I would expect the object to have lat and long values: Latlng(-34.509981, 150.792384)
Actual results:
The object has values that are close but are not precise. LatLng(-34.509981,<PHONE_NUMBER>9999997)
After reviewing the LatLng constructor it appears the error comes from precision loss in the longitudes normalisation:
const LatLng(double latitude, double longitude)
      : assert(latitude != null),
        assert(longitude != null),
        latitude =
            (latitude < -90.0 ? -90.0 : (90.0 < latitude ? 90.0 : latitude)),
        longitude = (longitude + 180.0) % 360.0 - 180.0;

Logs

[✓] Flutter (Channel stable, 1.20.2, on Mac OS X 10.15.5 19F101, locale en-AU)
    • Flutter version 1.20.2 at /Users/murray/dev/flutter
    • Framework revision bbfbf1770c (4 weeks ago), 2020-08-13 08:33:09 -0700
    • Engine revision 9d5b21729f
    • Dart version 2.9.1

[!] Android toolchain - develop for Android devices (Android SDK version 29.0.2)
    • Android SDK at <USER_DIR>/Library/Android/sdk
    • Platform android-29, build-tools 29.0.2
    • Java binary at: <USER_DIR>/Library/Application Support/JetBrains/Toolbox/apps/AndroidStudio/ch-0/193.6626763/Android
      Studio.app/Contents/jre/jdk/Contents/Home/bin/java
    • Java version OpenJDK Runtime Environment (build 1.8.0_242-release-1644-b3-6222593)
    ! Some Android licenses not accepted.  To resolve this, run: flutter doctor --android-licenses

[✓] Xcode - develop for iOS and macOS (Xcode 11.7)
    • Xcode at /Applications/Xcode.app/Contents/Developer
    • Xcode 11.7, Build version 11E801a
    • CocoaPods version 1.9.3

[✓] Android Studio (version 4.0)
    • Android Studio at <USER_DIR>/Library/Application Support/JetBrains/Toolbox/apps/AndroidStudio/ch-0/193.6626763/Android Studio.app/Contents
    • Flutter plugin version 36.1.1
    • Dart plugin version 183.6270
    • Java version OpenJDK Runtime Environment (build 1.8.0_242-release-1644-b3-6222593)

[!] VS Code (version 1.44.2)
    • VS Code at /Applications/Visual Studio Code.app/Contents
    ✗ Flutter extension not installed; install from
      https://marketplace.visualstudio.com/items?itemName=Dart-Code.flutter

[!] Connected device
    • Error: <User's> iPhone is not connected. Xcode will continue when <User's> iPhone is connected. (code -13)

! Doctor found issues in 3 categories.

This issue is reproducible with the latest version of the google_maps_flutter package (^0.5.32). We can easily test this by running the test case bellow, which will fail.
  test('LatLng precision test', () async {
    const lat = -34.509981;
    const lng = 150.792384;
    final latLng = LatLng(lat, lng);

    expect(latLng.latitude, equals(lat));
    expect(latLng.longitude, equals(lng)); // fails here
  });

Test Logs
package:test_api                                   expect
package:flutter_test/src/widget_tester.dart 369:3  expect
test/widget_test.dart 38:5                         main.<fn>

Expected: <150.792384>
  Actual: <150.79238399999997>

This is still reproducible on the current version of the plugin (google_maps_flutter: ^2.0.5).
Test error logs:
Expected: <150.792384>
  Actual: <150.79238399999997>

any solutions? still failing!

Expected: <150.792384>
  Actual: <150.79238399999997>

These are the same number to within the limits of representation of doubles. This is not related to the plugin, and also isn't a bug; this is just how floating point values work.


Deployment fails when using Custom Networking and when using custom Address space

Describe the bug
When using AKS Construction helper, the deployment fails with the following error:
{"status":"Failed","error":{"code":"DeploymentFailed","message":"At least one resource deployment operation failed. Please list deployment operations for details. Please see https://aka.ms/DeployOperations for usage details.","details":[{"code":"Conflict","message":"{\r\n  \"status\": \"Failed\",\r\n  \"error\": {\r\n    \"code\": \"ResourceDeploymentFailure\",\r\n    \"message\": \"The resource operation completed with terminal provisioning state 'Failed'.\",\r\n    \"details\": [\r\n      {\r\n        \"code\": \"DeploymentFailed\",\r\n        \"message\": \"At least one resource deployment operation failed. Please list deployment operations for details. Please see https://aka.ms/DeployOperations for usage details.\",\r\n        \"details\": [\r\n          {\r\n            \"code\": \"BadRequest\",\r\n            \"message\": \"{\\r\\n  \\\"error\\\": {\\r\\n    \\\"code\\\": \\\"NetcfgInvalidSubnet\\\",\\r\\n    \\\"message\\\": \\\"Subnet 'AzureFirewallManagementSubnet' is not valid in virtual network 'vnet-aks-rv-test'.\\\",\\r\\n    \\\"details\\\": []\\r\\n  }\\r\\n}\"\r\n          }\r\n        ]\r\n      }\r\n    ]\r\n  }\r\n}"}]}}

It appears that even when no Azure Firewall is requested in the helper, the helper attempts to create an AzureFirewallManagementSubnet
To Reproduce
Steps to reproduce the behavior:

Go to Networking Details tab
Under Network plugin, select "Use CNI..."
Under Default or Custom VNET, select Custom Networking
VNET Address space, anything, but the default space. EX: <IP_ADDRESS>/16
AKS Nodes Subnet, anything within the range.

I think this could have been fixed in #480 and just needs released.
@MattLeach25 - thoughts?

I think this could have been fixed in #480 and just needs released. @MattLeach25 - thoughts?

Yeah this is fixed with the new release.

We'll aim to cut a release tomorrow.
@romerve - if you clone the repo and target bicep/main.bicep instead of the release - then you should be good.

@MattLeach25 created a release today, so this should be fixed.


[Team 5] Starting Screen and Further Economy Enhancements

Here is a summary added in the pull request:

Added a level select screen, where you can choose a certain planet as a way of choosing a certain level (#111)
A lore screen describing the background of the game. (#96)
Added a new currency for bosses
Polished currency, fixed bugs and shows amount added to currency on click. (#121)

Excellent work!! The review section took forever to load due to those PNG files 😆

Great work @ryandmcneilly @Hasakev. Just need to add some tests, but otherwise happy for this merge to go ahead


Updated java libraries for spring boot and swagger, and github action

THIS SOFTWARE IS CONTRIBUTED SUBJECT TO THE TERMS OF THE FINOS Corporate Contributor License Agreement.
  THIS SOFTWARE MAY BE REDISTRIBUTED TO OTHERS ONLY BY EFFECTIVELY USING THIS OR ANOTHER EQUIVALENT DISCLAIMER IN ADDITION TO ANY OTHER REQUIRED LICENSE TERMS.

Suspending this temporarily due to https://github.com/actions/upload-artifact/issues/478 affecting the security job.

This is now ready for merge. Some changes in artifact-upload@v4 led to changing artifact naming.


fix: postgres container renaming

The Postgres container was renamed from pg to postgres in #362, but the name wasn't changed in all the places it needed to, causing name resolution failures in the provisioner.
Note: there are more places the pg abbreviation is used, like file names and CLI args. Happy to change these too if we want to be completely consistent.

Closing this since Pieter fixed this in 0.6.0 in #369


cmd/trace-agent/config: add test for multiple items

Still planning on merging this? if not I can close this out


Latest nostr sdk

Updated project to compile with latest nostr-sdk 0.22.
Some modifications introduced to some data for compatibility, completely to be tested.
Improved some management of config file dir command. Could be workin on windows too now, also if Os folder management it's a bit tricky. To be tested.

Hey buddy, tests are failing, can you fix them before merging it?

Fixed!
Give a look if you like it...
I changed settings.toml to settings.tpl.toml to have a template for doc to load on testing.
Issue is coming from expired invoice, but then with new settings we had an issue due to 0 as min amount.
I did this to fix...
Let me know @grunch !


PHOENIX-5728 : ExplainPlan with plan as attributes object

4.x backport of PR #990

:broken_heart: -1 overall

Vote
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Comment

+0 :ok:
reexec
5m 30s
Docker mode activated.

_ Prechecks _

+1 :green_heart:
dupname
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No case conflicting files found.

+1 :green_heart:
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Patch does not have any anti-patterns.

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The patch does not contain any @author tags.

+1 :green_heart:
test4tests
0m  0s
The patch appears to include 3 new or modified test files.

_ 4.x Compile Tests _

+1 :green_heart:
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11m 56s
4.x passed

+1 :green_heart:
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1m  0s
4.x passed

+1 :green_heart:
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1m 50s
4.x passed

+1 :green_heart:
javadoc
0m 47s
4.x passed

+0 :ok:
spotbugs
3m  7s
phoenix-core in 4.x has 950 extant spotbugs warnings.

_ Patch Compile Tests _

+1 :green_heart:
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6m 29s
the patch passed

+1 :green_heart:
compile
0m 58s
the patch passed

+1 :green_heart:
javac
0m 58s
the patch passed

-1 :x:
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1m 58s
phoenix-core: The patch generated 508 new + 4831 unchanged - 85 fixed = 5339 total (was 4916)

+1 :green_heart:
whitespace
0m  0s
The patch has no whitespace issues.

+1 :green_heart:
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3m 20s
the patch passed

_ Other Tests _

-1 :x:
unit
189m 12s
phoenix-core in the patch failed.

+1 :green_heart:
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0m 30s
The patch does not generate ASF License warnings.

230m  7s

Reason
Tests

Failed junit tests
phoenix.end2end.IndexToolForNonTxGlobalIndexIT

phoenix.end2end.BackwardCompatibilityIT

Subsystem
Report/Notes

Docker
ClientAPI=1.40 ServerAPI=1.40 base: https://ci-hadoop.apache.org/job/Phoenix/job/Phoenix-PreCommit-GitHub-PR/job/PR-1005/1/artifact/yetus-general-check/output/Dockerfile

GITHUB PR
https://github.com/apache/phoenix/pull/1005

Optional Tests
dupname asflicense javac javadoc unit spotbugs hbaseanti checkstyle compile

uname
Linux 4730ef03dc3d 4.15.0-112-generic #113-Ubuntu SMP Thu Jul 9 23:41:39 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux

Build tool
maven

Personality
dev/phoenix-personality.sh

git revision
4.x / 4f8eab9

Default Java
Private Build-1.8.0_242-8u242-b08-0ubuntu3~16.04-b08

checkstyle
https://ci-hadoop.apache.org/job/Phoenix/job/Phoenix-PreCommit-GitHub-PR/job/PR-1005/1/artifact/yetus-general-check/output/diff-checkstyle-phoenix-core.txt

unit
https://ci-hadoop.apache.org/job/Phoenix/job/Phoenix-PreCommit-GitHub-PR/job/PR-1005/1/artifact/yetus-general-check/output/patch-unit-phoenix-core.txt

Test Results
https://ci-hadoop.apache.org/job/Phoenix/job/Phoenix-PreCommit-GitHub-PR/job/PR-1005/1/testReport/

Max. process+thread count
5687 (vs. ulimit of 30000)

modules
C: phoenix-core U: phoenix-core

Console output
https://ci-hadoop.apache.org/job/Phoenix/job/Phoenix-PreCommit-GitHub-PR/job/PR-1005/1/console

versions
git=2.7.4 maven=3.3.9 spotbugs=4.1.3

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W2 d3 updates

Production edits to W2D3 tutorials:
-Separated out plotting functions, put helper functions right above where they’re used
-Renamed coding/discussion/demos with new order
-Uncommented coding exercises
-Cleared outputs

Avoided merge issues by making new PR using these tutorials


fix: remove ZIP_AVAILABLE that avoiding package loading

fix #66
fix #58
fix #67
fix #69

I prefer to keep ZIP_AVAILABLE in asmdef because opening a project with compile errors is less frequent than when introducing this.

The problem is about half package I want to install from nuget is some package from upm need.
In this situation, error will appear shows that the upm package need a dependency. So, I know I should install a nuget package with this importer. But I have to uninstall the upm package, install dependencies, reinstall the upm package.

ZIP_AVAILABLE is a flag that states that csc.rsp is set and can decompress Zip files. This package requires that the environment can unzip. So, if we remove ZIP_AVAILABLE from asmdef, users get a compile error when introducing this package. This makes it hard to install NuGet importer for Unity.

I'm not quite sure what's it. I haven't saw it take an affect anywhere. It's seems that ZIP_AVAILABLE only import System.IO.Compression.FileSystem in csc.rsp

The problem is about half package I want to install from nuget is some package from upm need.

I see, I understand the necessity.
I tried removing ZIP_AVAILABLE from asmdef and found it works differently for Unity2020 and Unity2021 or later. Unity2020 throws a compile error by this. Unity2021 or later works fine.

It's seems that ZIP_AVAILABLE only import System.IO.Compression.FileSystem in csc.rsp

Yes, correct. This package uses Compression.FileSystem, which causes compile errors. I prevented the compile errors by only compiling when ZIP_AVAILABLE is defined.
Therefore, the current version of Unity does not need to avoid compiling by using ZIP_AVAILABLE. So let's remove ZIP_AVAILABLE from asmdef.
I will write a note about this in the documentation.

My GitHub Actions seem broken so I will ignore the test results.
I will check and fix it in my environment.
I will release it after I have some features that I want to add.


Neural, Trendline, StdDev Strategies

Hello! Let me know if anything in this needs to be updated for the PR.
Most of the strats will require backfilling or will receive an error.
Neural will take some time to tune, but everything you need to tune it is there.
http://cs.stanford.edu/people/karpathy/convnetjs/demo/regression.html
For a demo of the regression learning neural code.

I pulled your repo and am getting the following error:
ubuntu@ip-172-31-12-176:~/zenbot-ai$ ./zenbot.sh trade --paper --reset_profit --stratagy neural
/home/ubuntu/zenbot-ai/extensions/strategies/neural/strategy.js:21
      if (s.lookback[s.options.start_trigger]) {
           ^

SyntaxError: Unexpected token .
    at createScript (vm.js:80:10)
    at Object.runInThisContext (vm.js:139:10)
    at Module._compile (module.js:599:28)
    at Object.Module._extensions..js (module.js:646:10)
    at Module.load (module.js:554:32)
    at tryModuleLoad (module.js:497:12)
    at Function.Module._load (module.js:489:3)
    at Module.require (module.js:579:17)
    at require (internal/module.js:11:18)
    at Object.<anonymous> (/home/ubuntu/zenbot-ai/extensions/strategies/neural/_codemap.js:4:24)
    at Module._compile (module.js:635:30)
    at Object.Module._extensions..js (module.js:646:10)
    at Module.load (module.js:554:32)
    at tryModuleLoad (module.js:497:12)
    at Function.Module._load (module.js:489:3)
    at Module.require (module.js:579:17)
    at require (internal/module.js:11:18)
    at /home/ubuntu/zenbot-ai/boot.js:25:19
    at Array.forEach (<anonymous>)
    at /home/ubuntu/zenbot-ai/boot.js:24:15
    at f (/home/ubuntu/zenbot-ai/node_modules/once/once.js:25:25)
    at Glob.<anonymous> (/home/ubuntu/zenbot-ai/node_modules/glob/glob.js:151:7)

I should be done with the neural strategy now, please pull and let me know if any errors since it's a lot of code.
Neural (takes a ton of processing power):

i trying get profit from this strategy but it look like impossible. Can you show any configuration for get profit like example ETH USD

Going to clean up code some

@Gr1dd, how did you get the neural strat profitable? I tried running in simulations and seems to loose, I'm currently running it in --paper mode, are you using defaults in the screenshot that you show above from 11 days ago?


[IMPROVEMENT] Support ARM64 benchmark test

Is your improvement request related to a feature? Please describe (👍 if you like this request)
Our e2e pipeline can do benchmark test automatically in AMD64 instance but not in ARM64
Describe the solution you'd like
If benchmark pipeline can support ARM64 that will be great
cc @yangchiu
Describe alternatives you've considered
N/A
Additional context
Current in pipline if we choose instance type to ARM64 and
K8S_DISTRO_NAME = rke, will error at
220 loader.go:223] Config not found: /src/longhorn-tests/benchmark_test/terraform/aws/sles/k3s.yaml
The connection to the server localhost:8080 was refused - did you specify the right host or port?

K8S_DISTRO_NAME = k3s, will error at
Error: wait for kbench running timeout

@chriscchien This belongs to test task, so next time u can create a test task instead of improvement.

kbench arm64 image pushed on dockerhub: https://hub.docker.com/r/yangchiu/kbench/tags.

After
(1) fix aws permission issue
(2) push kbench arm64 image
benchmark test can be run on arm64 instances now: https://ci.longhorn.io/job/private/job/longhorn-benchmark-test/39/,
but have to use k3s, since rke2 doesn't support arm64.


textarea not consistent

Looks like the background for text areas is transparent, should be themed.
Observe: Textarea rg styling doesn't define a background property

while the Input element does

Pls fix :3 <3

Ahh! I'll add this support when working on the other linked issue 🤙 thanks for the detail

@0xhanvalen Fixing this now -- quick question about the usage in the example. Are you using this in an app that supports light and dark mode?

This'll be fixed in the PR that includes the Input and Textarea additions. #57

@jonathanprozzi it shouldn't matter if it's light or dark mode I don't think

@jonathanprozzi it shouldn't matter if it's light or dark mode I don't think

For sure -- only reason I was asking is because the tokens for the textarea take an array for the bg color for the modes. It's one of the only ones that does this.
Will be fixed as soon as we publish the new changes and merge in #68


cluster-service: Add CS development configuration

This allows the local_CS command to fully configure the Cluster Service deployment without requiring manual editing of the development YAML file.

@microsoft-github-policy-service agree company="Red Hat"


C/C++ include file dependency analysis should discover include files referenced using a macro function

An #include directive can use a macro function invocation as its value. For example:
#define HEADER() "some-include.h"
#include HEADER()

Currently, Gradle's dependency analysis ignores these #include directives, so that the include files that they reference are not treated as inputs of the referring source files.
Note that #include directives that use an 'object-like' macro are handled correctly, if somewhat inefficiently. For example, this include is not ignored:
#define HEADER "some-include.h"
#include HEADER

There are some improvements in release for this. The C/C++ dependency analysis now handles macro functions with no arguments, for example #include HEADER().
The dependency analysis recognises but does not handle macro functions with some arguments, falling back to treating all header directories as inputs when these are present in source files.

This is done enough now, macro functions are handled the same way as macros now. There's still some further improvements to make, but these can be done as part of #301.


Token level or Entity level?

Hi,
Does this implementation use token-level or entity level evaluation?

Token level I would say. You can check https://github.com/glample/tagger/blob/master/evaluation/conlleval

Thanks


fix issue - html-hard

Pull Request Type
What kind of change does this PR introduce?
[ - ] Solved an issue/task
[ ] Bugfix
[ ] Feature
[ ] Code style update (formatting, local variables)
[ ] Refactoring (no functional changes, no api changes)
[ ] Build related changes
[ ] CI related changes
[ ] Documentation content changes
[ ] Other... Please describe:
What is the current behavior?
Task to create a functional clock
Issue Number: [Insert Issue Number (if applicable)] - #1451
What is the new behavior?
Implemented a functional and aesthetically pleasing clock
Other information

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Fix Ansible check mode for site.yml.sample playbook

Make sure the site.yml.sample playbook can be run in check mode by skipping
tasks that try to read the output of commands that have been skipped.
Requires #5717.
Signed-off-by: Benoît Knecht<EMAIL_ADDRESS>

jenkins test centos-container-update

jenkins test centos-container-all_in_one