Integrated terminal is printing ^C instead of canceling the command

Issue Type: Bug
Open integrated terminal
type a command
press ctrl-c
actual results: prints ^C after the command and doesn't cancel the command
expected: cancel the command go to a new blank command prompt
VS Code version: Code 1.32.1 (05f146c7a8f7f78e80261aa3b2a2e642586f9eb3, 2019-03-08T00:51:49.278Z)
OS version: Windows_NT x64 10.0.17763

System Info

Item
Value

CPUs
Intel(R) Core(TM) i5-4310M CPU @ 2.70GHz (4 x 2694)

GPU Status
2d_canvas: enabledchecker_imaging: disabled_offflash_3d: enabledflash_stage3d: enabledflash_stage3d_baseline: enabledgpu_compositing: enabledmultiple_raster_threads: enabled_onnative_gpu_memory_buffers: disabled_softwarerasterization: enabledsurface_synchronization: enabled_onvideo_decode: enabledwebgl: enabledwebgl2: enabled

Memory (System)
7.91GB (1.35GB free)

Process Argv

Screen Reader
no

VM
0%

Extensions (19)

Extension
Author (truncated)
Version

vscode-custom-css
be5
3.0.3

vscode-eslint
dba
1.8.2

vscode-faker
dee
1.3.0

xml
Dot
2.4.0

gitlens
eam
9.5.1

vscode-html-css
ecm
0.2.0

vscode-solution-explorer
fer
0.3.1

code-runner
for
0.9.7

reg
ion
0.0.2

latex-workshop
Jam
6.1.0

python
ms-
2019.2.5558

cpptools
ms-
0.21.0

csharp
ms-
1.17.1

Go
ms-
0.9.2

PowerShell
ms-
1.11.0

vscode-docker
Pet
0.5.2

material-icon-theme
PKi
3.6.3

ruby
reb
0.22.3

vscode-todo-highlight
way
1.0.4

(2 theme extensions excluded)

Bug still occurs in latest insiders, clean install
VS Code version: Code - Insiders 1.33.0-insider (9b849d9de7168eb4f685823bf9b9e27a0a8dae74, 2019-03-08T06:59:35.464Z)
OS version: Windows_NT x64 10.0.17763

System Info

Item
Value

CPUs
Intel(R) Core(TM) i5-4310M CPU @ 2.70GHz (4 x 2694)

GPU Status
2d_canvas: enabledchecker_imaging: disabled_offflash_3d: enabledflash_stage3d: enabledflash_stage3d_baseline: enabledgpu_compositing: enabledmultiple_raster_threads: enabled_onnative_gpu_memory_buffers: disabled_softwarerasterization: enabledsurface_synchronization: enabled_onvideo_decode: enabledwebgl: enabledwebgl2: enabled

Memory (System)
7.91GB (1.15GB free)

Process Argv

Screen Reader
no

VM
0%

Extensions: none

This is likely related to winpty, tracking in https://github.com/Microsoft/vscode/issues/45693

Still have it in latest insider even with windowsEnableConpty set to false.

@Tyriar Why is this issue along with #45693 closed if the solution is a feature that comes with a future version of windows?

@krokofant because the work on our side to support conpty is done, and as of last week it's enabled by default in vscode insiders (if Windows is >= build 18309). That's how we manage issues in this project.

@Tyriar I do appreciate the work and it seems like it will be great with this support. However, what confuses me a bit is that this issue arose for me just some days ago so I don't understand how the fix is conpty with a newer Windows. Ctrl+C worked for a long time in VSCode Insiders terminal and now it doesn't. 🤔

@krokofant ctrl+c has always only sometimes worked under the old backend winpty, you were likely just lucky and didn't see it not work much. Conpty is the future and it's maintained by the Console team at Microsoft so they'll actually be able to support future issues like these.


[Bug]: TypeError: 'ChatMessage' object is not subscriptable when MODEL_PATH=openbmb/MiniCPM3-4B

Is there an existing issue ? / 是否已有相关的 issue ?

[X] I have searched, and there is no existing issue. / 我已经搜索过了，没有相关的 issue。

Describe the bug / 描述这个 bug
无法使用openai_api_server_demo运行MiniCPM3-4B模型
To Reproduce / 如何复现

设置环境变量MODEL_PATH=openbmb/MiniCPM3-4B
运行openai_api_server_demo.py
运行openai_api_request_demo.py
报错TypeError: 'ChatMessage' object is not subscriptable

Expected behavior / 期望的结果
能够正常对话
Screenshots / 截图
minicpm-1  |
minicpm-1  | ==========
minicpm-1  | == CUDA ==
minicpm-1  | ==========
minicpm-1  |
minicpm-1  | CUDA Version 12.1.1
minicpm-1  |
minicpm-1  | Container image Copyright (c) 2016-2023, NVIDIA CORPORATION & AFFILIATES. All rights reserved.
minicpm-1  |
minicpm-1  | This container image and its contents are governed by the NVIDIA Deep Learning Container License.
minicpm-1  | By pulling and using the container, you accept the terms and conditions of this license:
minicpm-1  | https://developer.nvidia.com/ngc/nvidia-deep-learning-container-license
minicpm-1  |
minicpm-1  | A copy of this license is made available in this container at /NGC-DL-CONTAINER-LICENSE for your convenience.
minicpm-1  |
minicpm-1  | A new version of the following files was downloaded from https://huggingface.co/openbmb/MiniCPM3-4B:
minicpm-1  | - configuration_minicpm.py
minicpm-1  | . Make sure to double-check they do not contain any added malicious code. To avoid downloading new versions of the code file, you can pin a revision.
minicpm-1  | A new version of the following files was downloaded from https://huggingface.co/openbmb/MiniCPM3-4B:
minicpm-1  | - modeling_minicpm.py
minicpm-1  | . Make sure to double-check they do not contain any added malicious code. To avoid downloading new versions of the code file, you can pin a revision.
minicpm-1  | INFO:     Started server process [27]
minicpm-1  | INFO:     Waiting for application startup.
minicpm-1  | INFO:     Application startup complete.
minicpm-1  | INFO:     Uvicorn running on http://<IP_ADDRESS>:8000 (Press CTRL+C to quit)
minicpm-1  | 2024-09-07 03:50:30.021 | DEBUG    | __main__:create_chat_completion:240 - ==== request ====
minicpm-1  | {'messages': [ChatMessage(role='system', content='\nCurrent model: gpt-3.5-turbo\nCurrent date: 2024-09-07T03:50:30.016Z\n\nYou are a helpful assistant. You can help me by answering my que
stions. You can also ask me questions.', name=None), ChatMessage(role='user', content='小明的爷爷有三个孙子，大孙子叫大毛，三孙子叫三毛，二孙子叫什么？', name=None)], 'temperature': 0.7, 'top_p': 1.0, 'max_tokens': 2048, 'echo': False, 'repetition_penalty': 1.1, 'tools': None}
minicpm-1  | INFO:     <IP_ADDRESS>:35712 - "POST /v1/chat/completions HTTP/1.1" 200 OK
minicpm-1  | ERROR:    Exception in ASGI application
minicpm-1  | Traceback (most recent call last):
minicpm-1  |   File "/opt/conda/lib/python3.12/site-packages/sse_starlette/sse.py", line 289, in __call__
minicpm-1  |     await wrap(partial(self.listen_for_disconnect, receive))
minicpm-1  |   File "/opt/conda/lib/python3.12/site-packages/sse_starlette/sse.py", line 278, in wrap
minicpm-1  |     await func()
minicpm-1  |   File "/opt/conda/lib/python3.12/site-packages/sse_starlette/sse.py", line 228, in listen_for_disconnect
minicpm-1  |     message = await receive()
minicpm-1  |               ^^^^^^^^^^^^^^^
minicpm-1  |   File "/opt/conda/lib/python3.12/site-packages/uvicorn/protocols/http/h11_impl.py", line 534, in receive
minicpm-1  |     await self.message_event.wait()
minicpm-1  |   File "/opt/conda/lib/python3.12/asyncio/locks.py", line 212, in wait
minicpm-1  |     await fut
minicpm-1  | asyncio.exceptions.CancelledError: Cancelled by cancel scope 7f4a63169970
minicpm-1  |
minicpm-1  | During handling of the above exception, another exception occurred:
minicpm-1  |
minicpm-1  |   + Exception Group Traceback (most recent call last):
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/uvicorn/protocols/http/h11_impl.py", line 406, in run_asgi
minicpm-1  |   |     result = await app(  # type: ignore[func-returns-value]
minicpm-1  |   |              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/uvicorn/middleware/proxy_headers.py", line 70, in __call__
minicpm-1  |   |     return await self.app(scope, receive, send)
minicpm-1  |   |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/fastapi/applications.py", line 1054, in __call__
minicpm-1  |   |     await super().__call__(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/applications.py", line 113, in __call__
minicpm-1  |   |     await self.middleware_stack(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/middleware/errors.py", line 187, in __call__
minicpm-1  |   |     raise exc
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/middleware/errors.py", line 165, in __call__
minicpm-1  |   |     await self.app(scope, receive, _send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/middleware/cors.py", line 85, in __call__
minicpm-1  |   |     await self.app(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/middleware/exceptions.py", line 62, in __call__
minicpm-1  |   |     await wrap_app_handling_exceptions(self.app, conn)(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/_exception_handler.py", line 62, in wrapped_app
minicpm-1  |   |     raise exc
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/_exception_handler.py", line 51, in wrapped_app
minicpm-1  |   |     await app(scope, receive, sender)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/routing.py", line 715, in __call__
minicpm-1  |   |     await self.middleware_stack(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/routing.py", line 735, in app
minicpm-1  |   |     await route.handle(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/routing.py", line 288, in handle
minicpm-1  |   |     await self.app(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/routing.py", line 76, in app
minicpm-1  |   |     await wrap_app_handling_exceptions(app, request)(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/_exception_handler.py", line 62, in wrapped_app
minicpm-1  |   |     raise exc
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/_exception_handler.py", line 51, in wrapped_app
minicpm-1  |   |     await app(scope, receive, sender)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/starlette/routing.py", line 74, in app
minicpm-1  |   |     await response(scope, receive, send)
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/sse_starlette/sse.py", line 275, in __call__
minicpm-1  |   |     async with anyio.create_task_group() as task_group:
minicpm-1  |   |   File "/opt/conda/lib/python3.12/site-packages/anyio/_backends/_asyncio.py", line 680, in __aexit__
minicpm-1  |   |     raise BaseExceptionGroup(
minicpm-1  |   | ExceptionGroup: unhandled errors in a TaskGroup (1 sub-exception)
minicpm-1  |   +-+---------------- 1 ----------------
minicpm-1  |     | Traceback (most recent call last):
minicpm-1  |     |   File "/opt/conda/lib/python3.12/site-packages/sse_starlette/sse.py", line 278, in wrap
minicpm-1  |     |     await func()
minicpm-1  |     |   File "/opt/conda/lib/python3.12/site-packages/sse_starlette/sse.py", line 258, in stream_response
minicpm-1  |     |     async for data in self.body_iterator:
minicpm-1  |     |   File "/app/openai_api_server_demo.py", line 245, in stream_response
minicpm-1  |     |     for new_response in generate_minicpm(model, tokenizer, gen_params):
minicpm-1  |     |   File "/app/openai_api_server_demo.py", line 153, in generate_minicpm
minicpm-1  |     |     inputs = tokenizer.apply_chat_template(messages, tokenize=False, add_generation_prompt=False)
minicpm-1  |     |              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
minicpm-1  |     |   File "/cache/huggingface/modules/transformers_modules/openbmb/MiniCPM3-4B/75f9f1097d9d66d11f37fff49210bf940455f8ac/tokenization_minicpm.py", line 45, in apply_chat_template
minicpm-1  |     |     check_messages(conversation, tools)
minicpm-1  |     |   File "/cache/huggingface/modules/transformers_modules/openbmb/MiniCPM3-4B/75f9f1097d9d66d11f37fff49210bf940455f8ac/tokenization_minicpm.py", line 183, in check_messages
minicpm-1  |     |     if message["role"] == "assistant" and "tool_calls" in message and len(message["tool_calls"]) > 0:
minicpm-1  |     |        ~~~~~~~^^^^^^^^
minicpm-1  |     | TypeError: 'ChatMessage' object is not subscriptable
minicpm-1  |     +------------------------------------

Environment / 环境
- OS: [Docker Ubuntu 22.04]
- Pytorch: [torch '2.4.1+cu121']
- CUDA: [CUDA 12.1.1]
- Device: [RTX3090]

Additional context / 其他信息
No response

你这个问题我好像遇到过，使用9/5最新发布的MiniCPM3-4B模型，不能用该项目demo/openai_api_demo/openai_api_server_demo.py启动，可以看到这个提交日期是5个月以前，看样子是不兼容最新的模型文件。
你需要拉取最新代码，使用该项目目录：demo/function_call/openai_api_server.py 这个文件来启动openapi服务。不过好像开发者还是没更新全，依旧启动还是有些问题，可能与conda相关依赖有关

你这个问题我好像遇到过，使用9/5最新发布的MiniCPM3-4B模型，不能用该项目demo/openai_api_demo/openai_api_server_demo.py启动，可以看到这个提交日期是5个月以前，看样子是不兼容最新的模型文件。 你需要拉取最新代码，使用该项目目录：demo/function_call/openai_api_server.py 这个文件来启动openapi服务。不过好像开发者还是没更新全，依旧启动还是有些问题，可能与conda相关依赖有关

对的，MiniCPM3-4B 请使用demo/function_call/openai_api_server.py启动openai服务。如果启动有问题，请附上报错信息。
此外，由于vLLM已经默认支持MiniCPM-2B，如果要启动openai服务，可以直接使用vLLM。


Added Windows support to test harness

Unfortunately, Windows cannot support the current multi-board testing
framework. Thus, only single-board tests can be run with the test
harness on Windows.
@Tahreeem Could you please check if this works on your computer?

Tested this on macOS; all tests pass @Tahreeem

worked like a charm!

Great, thanks @Tahreeem ; merging


[BUG] - incorrect max exposure and others for arducam-pivariety (IMX462)

Describe the bug
Running rpicam-still --list-cameras produces the following.  Notice the "ExposureTime" is [14..0] which is incorrect - the maximum time isn't specified and should be.
Available cameras
-----------------
0 : arducam-pivariety [1920x1080 10-bit RGGB] (/base/soc/i2c0mux/i2c@1/arducam_pivariety@c)
    Modes: 'SRGGB10_CSI2P' : 1920x1080 [60.00 fps - (0, 0)/1920x1080 crop]

    Available controls for 1920x1080 SRGGB10_CSI2P mode:
    ----------------------------------------------------
    AeConstraintMode : [0..3]
    AeEnable : [false..true]
    AeExposureMode : [0..3]
    AeMeteringMode : [0..3]
    AnalogueGain : [1.000000..200.000000]
    AwbEnable : [false..true]
    AwbMode : [0..7]
    Brightness : [-1.000000..1.000000]
    ColourGains : [0.000000..32.000000]
    Contrast : [0.000000..32.000000]
    ExposureTime : [14..0]
    ExposureValue : [-8.000000..8.000000]
    FrameDurationLimits : [16666..15534444]
    NoiseReductionMode : [0..4]
    Saturation : [0.000000..32.000000]
    ScalerCrop : [(0, 0)/64x64..(0, 0)/1920x1080]
    Sharpness : [0.000000..16.000000]

Further, running rpicam-still -v --shutter 5000 --metadata SOME_FILE ... produces the following.  Note that no default Brightness, Saturation, or Sharpness were given:
{
    "ExposureTime": 5000000,
    "FocusFoM": 1351,
    "AnalogueGain": 1.330000,
    "ColourCorrectionMatrix": [ 1.831948, -0.820011, -0.011936, -0.430259, 1.753510, -0.323250, -0.071906, -0.713727, 1.785643 ],
    "FrameDuration": 5000059,
    "Lux": 0.090005,
    "AeLocked": false,
    "ColourGains": [ 1.000000, 1.000000 ],
    "DigitalGain": 1.891665,
    "ColourTemperature": 4500,
    "SensorBlackLevels": [ 4096, 4096, 4096, 4096 ],
    "ScalerCrop": "(0, 0)/1920x1080",
    "SensorTimestamp":<PHONE_NUMBER>00
}

IMHO it this output should always contain ALL the values used

Support for Arducam's PiVariety cameras has never been upstreamed by them, therefore they do not run with the Raspberry Pi libcamera or this repo for rpicam-apps.
Arducam's branches are at https://github.com/Arducam/libcamera and https://github.com/ArduCAM/libcamera-apps/, although I note they have disabled issues on those repos.
Support for Arducam products is through their support channels at https://forum.arducam.com/ or https://www.arducam.com/contact-arducam/
I suspect because of the way that PiVariety has been implemented that the max exposure time is not known as the microcontroller on the sensor board may not provide that information.


Improve appearance of preference dialog entries

Hey, thanks for bringing such an awesome app to live!
This PR adds a RoundedCornerShape for the radio list items in the preferences to improve the visual effect when hovering them, as it's been edged previously.
Cheers

Thank you for using it, and thank you for the PR! I'm a bit preoccupied with work at the moment, I will check it out first chance I get.

I tested this PR and while I like the rounded corners of the ripple and the extra padding, the list items are no longer aligned with the title. Google just extends the ripple to the edges of the dialog in their apps, so maybe we could do that instead?

I'm not really sure how that could work because dialogs in Jetpack Compose have a default padding, so we can't use the full width because the dialog itself takes some of it. It might be possible that we can somehow remove that default dialog padding, but I'm not aware of any unfortunately.

Hmm I don't think Compose Dialogs have implicit padding. But I think I added some padding to the common dialog composable in the app without thinking about the ripple effect :)


Less flashy closing-remarks

Fixes #6482
Addresses https://github.com/refined-github/refined-github/issues/5851#issuecomment-1195289714
May replace #6489

Test URLs

PR: https://github.com/refined-github/refined-github/pull/5600
Locked PR: https://github.com/eslint/eslint/pull/17
Archived repo: https://github.com/fregante/iphone-inline-video/pull/130
RGH tagged PR: https://github.com/refined-github/sandbox/pull/1

Released

Unreleased

This is a good chance to refactor createBanner a bit:
https://github.com/refined-github/refined-github/blob/bac8aec98b453861985d0d8add4cf474e417c756/source/github-helpers/banner.tsx#L12-L13
- // Classes copied from "had recent pushes" banner from repo home
+ // https://primer.style/css/components/alerts#with-action-button
const classes = 'btn btn-sm flash-action';

https://github.com/refined-github/refined-github/blob/bac8aec98b453861985d0d8add4cf474e417c756/source/github-helpers/banner.tsx#L35-L44

-

-

			{props.icon}
			{/* TODO: Drop `any` after https://github.com/frenic/csstype/issues/177 */}
			{props.text}
-

		{button}
-

This was intended to be part of #6489

As the inline comment suggests, we're using GitHub’s own classes. I'm pretty sure that they lead to a better result than just that. See the current mobile version:

versus what I get (if I didn't make mistakes) by applying your change:

Indeed 🙂

That's float for you!
It doesn't make sense to revert that PR. I will just create a new one to get rid of flash completely.

I will just create a new one to get rid of flash completely.

Reasoning?

Reasoning?

Because we are overriding most things from that class?

Reasoning?

Because we are overriding most things from that class?

We're not? Borders, rounding, spacing, colors, icon colors still come from flash. None of those classes actually override anything, we're only overriding the background right?

It looks like GitHub uses the same format and location to display status in open PRs:

The HTML

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        aria-hidden="true"
        height="16"
        viewBox="0 0 16 16"
        version="1.1"
        width="16"
        data-view-component="true"
        class="octicon octicon-rocket"
      >
        <path
          d="M14.064 0h.186C15.216 0 16 .784 16 1.75v.186a8.752 8.752 0 0 1-2.564 6.186l-.458.459c-.314.314-.641.616-.979.904v3.207c0 .608-.315 1.172-.833 1.49l-2.774 1.707a.749.749 0 0 1-1.11-.418l-.954-3.102a1.214 1.214 0 0 1-.145-.125L3.754 9.816a1.218 1.218 0 0 1-.124-.145L.528 8.717a.749.749 0 0 1-.418-1.11l1.71-2.774A1.748 1.748 0 0 1 3.31 4h3.204c.288-.338.59-.665.904-.979l.459-.458A8.749 8.749 0 0 1 14.064 0ZM8.938 3.623h-.002l-.458.458c-.76.76-1.437 1.598-2.02 2.5l-1.5 2.317 2.143 2.143 2.317-1.5c.902-.583 1.74-1.26 2.499-2.02l.459-.458a7.25 7.25 0 0 0 2.123-5.127V1.75a.25.25 0 0 0-.25-.25h-.186a7.249 7.249 0 0 0-5.125 2.123ZM3.56 14.56c-.732.732-2.334 1.045-3.005 1.148a.234.234 0 0 1-.201-.064.234.234 0 0 1-.064-.201c.103-.671.416-2.273 1.15-3.003a1.502 1.502 0 1 1 2.12 2.12Zm6.94-3.935c-.088.06-.177.118-.266.175l-2.35 1.521.548 1.783 1.949-1.2a.25.25 0 0 0 .119-.213ZM3.678 8.116 5.2 5.766c.058-.09.117-.178.176-.266H3.309a.25.25 0 0 0-.213.119l-1.2 1.95ZM12 5a1 1 0 1 1-2 0 1 1 0 0 1 2 0Z"
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      </svg>

This branch has not been deployed

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error in AmazonMusic initialization

re.sub(r'^[^{]*',` '', re.sub(r';$', '', line))
on line 107 of amazonmusic.py returns absolutely nothing.
I believe this is the only thing causing problems. I was wondering if anyone could shed some light on the situation.

Replace line 106 with:
if 'var applicationContextConfiguration =' in line:


Vcpkg dlls not copied into AppX in incremental builds

Describe the bug
When I do a rebuild (without touching my .cpp files, i.e. only changing .hlsl on .xaml) I get

To fix this I can
App9\x64\Debug\App9>copy *d.dll AppX\

The problem is the libprotobuf-lited.dll is not in AppX/ but it is in the parent directory.
Steps to reproduce the bug
Install Protobuf https://github.com/protocolbuffers/protobuf/blob/main/src/README.md#c-protobuf---windows
Clone https://github.com/tom-huntington/vcpkg-winui3-build-bug
Build.
Edit MainWindow.xaml.
Rebuilding should reproduce.
Copying dlls into AppX from parent should fix. Also editing the cpp files should fix also.
NuGet package version
WinUI 3 - Windows App SDK 1.5.4: 1.5.240607001

I ran into this from time to time. It does not happens 100% of the time, and a clean->rebuild seems to solve this. This is very annoying.

clean->rebuild seems to solve this

I only need to rebuild one compilation unit. But the linking takes to long. It's faster to have a Command Prompt Window open and do the copy manually, then you don't need to rebuild


Add user search

[!WARNING]
This pull request is not mergeable via GitHub because a downstack PR is open. Once all requirements are satisfied, merge this PR as a stack on Graphite.
Learn more

Current dependencies on/for this PR:

#43  👈
#42
#41
main

This stack of pull requests is managed by Graphite.


[C] Update Menues in Boxtribute FE and dropapp to include links to visualizations

@aerinsol could you tell me what the menu items should show up (and their naming) for statviz in dropapp and v2?

@HaGuesto I think this should just replace Fancy Graphs.


[BUG] Azure.Search.Documents returns 'Parital Content' Error for semantic hybrid search

Library name and version
Azure.Search.Documents 11.5.1
Describe the bug
We are integrating the Azure AI search semantic hybrid search service. The uploaded documents contain a unique key and five searchable fields. Out of five one is a vector field.
While performing semantic hybrid search and semantic-only search, the SDK throws a 206 partial content error. If I send the request excluding the vector field using the filter parameter then the request is successful with 200 status code.
Expected behavior
Successful response with a 200 status code
Actual behavior

Reproduction Steps
Upload the document to Azure AI search with three fields, two non-vector fields, and one vector
Perform the semantic hybrid search similar to the code snippet shown below:
var searchOptions = new SearchOptions
{
    VectorSearch = new()
    {
    Queries = { new VectorizedQuery(queryEmbeddings.ToArray()) { KNearestNeighborsCount = 3, Fields = { "ContentVector" } } }
    },
    SemanticSearch = new()
    {
        SemanticConfigurationName = "training-data-semantic-config",
        QueryCaption = new(QueryCaptionType.Extractive),
        QueryAnswer = new(QueryAnswerType.Extractive),
    },
    QueryType = SearchQueryType.Semantic,
    Size = k,
    Select = { "Name", "Description", "Authentication", "Content" }
};

SearchResults<SearchDocument> response = await searchClient.SearchAsync<SearchDocument>(query, searchOptions);

Environment
.NET SDK:
Version: 8.0
Runtime Environment:
OS Name: Windows 11

Hi @mehnoorsiddiqui.  Thanks for reaching out and we regret that you're experiencing difficulties.   The Azure SDK packages do not have insight nor influence over an operation failure, they just surface the HTTP error returned by the Search service.  As a result, this is not an issue that the maintainers of the Azure SDK can assist with.   You will need assistance from the Azure Search service team.
To ensure that the right team has visibility and can help, your best path forward for would be to open an Azure support request or inquire on the Microsoft Q&A site.   I'm going to close this out; if I've misunderstood what you're describing, please let us know in a comment and we'd be happy to assist as we're able.


Option to Disable AuthN and AuthZ

Is your feature request related to a problem? Please describe.
I run label-studio behind a gateway which already does the AuthN and AuthZ for any request reaching label-studio. For this reason the login screen and user management is unnecessary in my case.
Describe the solution you'd like
It would be ideal to have a toggle (e.g. an env variable) to disable AuthN and AuthZ entirely for label-studio. This would ease the use of label-studio in my case, because the users don't have to login.

Thanks for the feature suggestion. We'll file the request for future consideration and will update this ticket as necessary.

Nice idea!
It would also be nice to allow to determine the current user/email from specific header fields.


Mapping a field between a borsh type to a user type

as suggested in this issue:
https://github.com/near/borsh-js/issues/5#issuecomment-764648922

Hey @defactojob , thank you once more for the contribution! Can you please take a look at the comments from @ailisp so we can merge all 3 of your PR's?

@volovyk-s ok, will handle this


Twig files path

To more closely match the directory structure suggested by Craft CMS and Commerce, please consider changing the path that Twig related items are generated in (e.g. variables, extensions etc.) to be web/twig (e.g. web/twig/variables/MyVariable.php, web/twig/Extension.php etc.).

Going to keep it as is for now


use MCMC for utils.get_walkers positions

Is your feature request related to a problem? Please describe.
Using PRISM to probe a large parameter space and then calling utils.get_walkers can be very expensive as the whole parameter space needs to be re-evaluated for a small percentage of plausible regions.
Describe the solution you would like
Allow for an alternate option to start at pipe.impl_sam and explore nearby parameter space until hitting implausible regions.

@kecnry Yeah, finding a large number of plausible samples in a small plausible space can be very expensive.
For analyzing the emulator, it is required to use Latin-Hypercube sampling in order to avoid biasing.
But, for obtaining plausible MCMC starting positions, an alternative way would be possible.
I will have a look at that and see if I can implement such a thing in a nice way.

@kecnry So, some updates: I got a somewhat working implementation right now, but it is not fast enough when dealing with very small parameter spaces.
As I have a few very important deadlines coming up, I am not sure how soon I can do the proper implementation.
It might take until the end of next week.

@kecnry I have now implemented the new functionality into the 'utils.get_walkers' function.
Can you check if it performs as you expect?

It seems to work!  The example we discussed that would have taken days now takes 20-30 seconds to get the walkers, so that's definitely promising.
Just to be clear: if I don't pass init_walkers, then this starts at pipe.impl_sam and otherwise it'll re-search the whole grid with roughly-evenly-sampled init_walkers (so essentially just doing Metropolis-Hastings over the whole parameter space)?  I read the docstring, but couldn't really figure out what the expected behavior should be in this case.
In the cases where 0 plausible samples are returned by analyze, would you suggest using this with init_walkers or re-running with a more-conservative impl_cut or finer sampling?

Awesome.
And no, both input arguments do something differently.
If you give a value to init_walkers, it will create an LHD of that size and evaluate it in the emulator, like before. Not giving it will use impl_sam.
If you also give a value for req_n_walkers, then these will be used as the starting points for all MCMC chains in the MH sampling.
So, the way that the init_walkers argument works has not changed. What is different now is that when you provide a value for req_n_walkers, then instead of returning all plausible samples in init_walkers, it uses them to find the required number of plausible starting positions.

You do have to be careful though.
If the plausible samples in init_walkers do not cover all plausible regions because they were too sparsely sampled, the MH sampling algorithm will not find them either.
An example of this can be seen in the following:

The top plot is the projection figure of an emulator that I was testing the algorithm with (GaussianLink).
I then used 7 plausible samples to find 10k plausible starting positions, which are shown in the bottom plot.
As you can see there, it captures the main plausible region perfectly fine (even the density), but there was still a very small plausible region at the top left (around [1.5, 9.0]).
Although it is possible that sampling more densely for the projections would have removed that region, it is currently a plausible region that was not covered with the MH sampling.


Node12 + fs-xattr < v0.3.0 has problems compiling

[x] I have read the contribution documentation for this project.
[x] I agree to follow the code of conduct that this project follows, as appropriate.
[x] I have searched the issue tracker for an issue that matches the one I want to file, without success.

Please describe your issue:
Installing electron-forge v5.2.4 either in local project or globally, using npm install electron-forge (or with -g) produces the following behaviour:
npm WARN deprecated<EMAIL_ADDRESS>cross-spawn no longer requires a build toolchain, use it instead
npm WARN deprecated<EMAIL_ADDRESS>wrench.js is deprecated! You should check out fs-extra (https://github.com/jprichardson/node-fs-extra) for any operations you were using wrench for. Thanks for all the usage over the years.
npm WARN deprecated<EMAIL_ADDRESS>please upgrade to graceful-fs 4 for compatibility with current and future versions of Node.js
npm WARN deprecated<EMAIL_ADDRESS>This module relies on Node.js's internals and will break at some point. Do not use it, and update to<EMAIL_ADDRESS>npm WARN deprecated<EMAIL_ADDRESS>Please update to minimatch 3.0.2 or higher to avoid a RegExp DoS issue
/usr/local/bin/electron-forge-vscode-win -> /usr/local/lib/node_modules/electron-forge/script/vscode.cmd
/usr/local/bin/forge -> /usr/local/lib/node_modules/electron-forge/dist/electron-forge.js
/usr/local/bin/electron-forge -> /usr/local/lib/node_modules/electron-forge/dist/electron-forge.js
/usr/local/bin/electron-forge-vscode-nix -> /usr/local/lib/node_modules/electron-forge/script/vscode.sh

><EMAIL_ADDRESS>install /usr/local/lib/node_modules/electron-forge/node_modules/fs-xattr
> node-gyp rebuild

  CXX(target) Release/obj.target/xattr/src/async.o
../src/async.cc:35:15: warning: 'Call' is deprecated [-Wdeprecated-declarations]
    callback->Call(1, argv);
              ^
../../nan/nan.h:1739:3: note: 'Call' has been explicitly marked deprecated here
  NAN_DEPRECATED inline v8::Local<v8::Value>
  ^
../../nan/nan.h:104:40: note: expanded from macro 'NAN_DEPRECATED'
# define NAN_DEPRECATED __attribute__((deprecated))
                                       ^
../src/async.cc:52:46: error: no matching member function for call to 'ToObject'
    v8::Local<v8::Object> bufferObj = value->ToObject();
                                      ~~~~~~~^~~~~~~~
/Users/don/.node-gyp/12.3.1/include/node/v8.h:2532:44: note: candidate function not viable: requires single argument 'context', but no arguments were provided
  V8_WARN_UNUSED_RESULT MaybeLocal<Object> ToObject(
                                           ^
/Users/don/.node-gyp/12.3.1/include/node/v8.h:2546:35: note: candidate function not viable: requires single argument 'isolate', but no arguments were provided
                    Local<Object> ToObject(Isolate* isolate) const);
                                  ^
../src/async.cc:129:15: warning: 'Call' is deprecated [-Wdeprecated-declarations]
    callback->Call(2, argv);
              ^
../../nan/nan.h:1739:3: note: 'Call' has been explicitly marked deprecated here
  NAN_DEPRECATED inline v8::Local<v8::Value>
  ^
../../nan/nan.h:104:40: note: expanded from macro 'NAN_DEPRECATED'
# define NAN_DEPRECATED __attribute__((deprecated))
                                       ^
../src/async.cc:186:15: warning: 'Call' is deprecated [-Wdeprecated-declarations]
    callback->Call(2, argv);
              ^
../../nan/nan.h:1739:3: note: 'Call' has been explicitly marked deprecated here
  NAN_DEPRECATED inline v8::Local<v8::Value>
  ^
../../nan/nan.h:104:40: note: expanded from macro 'NAN_DEPRECATED'
# define NAN_DEPRECATED __attribute__((deprecated))
                                       ^
3 warnings and 1 error generated.
make: *** [Release/obj.target/xattr/src/async.o] Error 1
gyp ERR! build error
gyp ERR! stack Error: `make` failed with exit code: 2
gyp ERR! stack     at ChildProcess.onExit (/usr/local/lib/node_modules/npm/node_modules/node-gyp/lib/build.js:262:23)
gyp ERR! stack     at ChildProcess.emit (events.js:200:13)
gyp ERR! stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:272:12)
gyp ERR! System Darwin 18.6.0
gyp ERR! command "/usr/local/Cellar/node/12.3.1/bin/node" "/usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js" "rebuild"
gyp ERR! cwd /usr/local/lib/node_modules/electron-forge/node_modules/fs-xattr
gyp ERR! node -v v12.3.1
gyp ERR! node-gyp -v v3.8.0
gyp ERR! not ok

><EMAIL_ADDRESS>install /usr/local/lib/node_modules/electron-forge
> node tabtab-install.js

npm WARN optional SKIPPING OPTIONAL DEPENDENCY<EMAIL_ADDRESS>(node_modules/electron-forge/node_modules/fs-xattr):
npm WARN optional SKIPPING OPTIONAL DEPENDENCY<EMAIL_ADDRESS>install: `node-gyp rebuild`
npm WARN optional SKIPPING OPTIONAL DEPENDENCY: Exit status 1

+<EMAIL_ADDRESS>added 4 packages from 2 contributors and updated 1 package in 4.679s

I suspect that this is related to this issue which was resolved by the latest version of fs-xattr (v0.3.0).

Console output when you run electron-forge with the environment variable DEBUG=electron-forge:*. (Instructions on how to do so here). Please include the stack trace if one exists.
Unrelated, problem is with install, not running the app

What command line arguments are you passing?
None

What does your config.forge data in package.json look like?
Unrelated

Please provide either a failing minimal testcase (with a link to the code) or detailed steps to
reproduce your problem. Using electron-forge init is a good starting point, if that is not the
source of your problem.

Does this happen with Electron Forge v6?

Never mind, it does. This is a problem with a (very) upstream dependency: https://github.com/LinusU/node-appdmg/issues/176

I'm not sure if you want me to create another issue for it, but something upstream is also requiring<EMAIL_ADDRESS>which is not compatible with Node 12<EMAIL_ADDRESS>is the latest.

See this issue

Forge v5 or v6 does not have a dependency on grpc, I checked the yarn.lock for both. It's more likely a dependency of your app.

Thanks, I'll keep digging.

The fix for this will only be in Forge v6 as the fix in appdmg was released in a version that requires Node 8 (Forgev5 requires Node 6 compatibility).

Steps to resolving this issue:

Approve/merge https://github.com/electron-userland/electron-installer-dmg/pull/40
Release a new major version of electron-installer-dmg
New PR for Forge v6

It seems v5.2.4 still has this problem (appdmg/fs-xattr), and it's the latest official release?  Will there be a bug fix of the v5.* line, or if not, any thoughts on releasing the v6.* line so it's more easily installable?


Closes: #1

For training purpose only.
Updated validations.py python script.
Fixed the behavior of validate_user function in validations.py.
Fixes #<issue_number_goes_here>

It's a good idea to open an issue first for discussion.

[ ] Tests pass
[ ] Appropriate changes to README are included in PR

merged pull request 1 and 2

merged pull request 1 and 2


Modernize

This fixes the conda-build 1.18 issue, and also updates the packages to use the new skip feature included in conda-build, which doesn't require a separate skip.yaml file. I also updated some packages to their latest versions.

Niiiice!

great work Robert, thanks!
Am 10/10/15 um 02:42 schrieb Robert T. McGibbon:

This fixes the conda-build 1.18 issue, and also updates the packages
to use the new skip feature included in conda-build, which doesn't
require a separate |skip.yaml| file. I also updated some packages to
their latest versions.

    You can view, comment on, or merge this pull request online at:

https://github.com/omnia-md/conda-recipes/pull/343
    Commit Summary

Use the new skip mechanism

Remove skip_packages code from conda-build-all

add cvxcanon required for cvxpy

Update numdifftools
File Changes

M alchemy/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-0 (3)

D alchemy/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-1 (2)

M algopy/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-2 (9)

M bhmm/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-3 (4)

M boost/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-4 (4)

D boost/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-5 (2)

M cclib/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-6
(33)

M conda-build-all
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-7
(38)

M covar/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-8 (1)

A cvxcanon/bld.bat
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-9 (2)

A cvxcanon/build.sh
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-10
(2)

A cvxcanon/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-11
(30)

M cvxpy/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-12
(10)

M doxygen/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-13
(4)

D doxygen/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-14
(3)

M ecos/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-15
(16)

A ecos/run_test.py
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-16
(33)

M ensembler/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-17
(2)

D ensembler/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-18
(4)

M fastcluster/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-19
(12)

M freeglut/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-20
(4)

D freeglut/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-21
(3)

M glew/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-22
(10)

D glew/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-23
(3)

M jom/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-24
(4)

D jom/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-25
(3)

D jpype1/bld.bat
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-26
(2)

D jpype1/build.sh
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-27
(21)

D jpype1/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-28
(26)

M mdtraj/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-29
(4)

M mingwpy/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-30
(4)

D mingwpy/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-31
(3)

M msmbuilder/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-32
(4)

M numdifftools/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-33
(8)

M openmm/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-34
(2)

D openmm/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-35
(3)

M openmmtools/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-36
(4)

D openmmtools/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-37
(3)

M openmoltools/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-38
(2)

D openmoltools/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-39
(3)

M pdbfixer/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-40
(2)

D pdbfixer/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-41
(3)

M pyhmc/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-42
(4)

M pymbar/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-43
(6)

D pymbar/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-44
(2)

M pymol/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-45
(11)

D pymol/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-46
(3)

M python-coveralls/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-47
(31)

D python-coveralls/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-48
(2)

M pytram/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-49
(16)

D pytram/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-50
(2)

M pyublas/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-51
(6)

D pyublas/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-52
(2)

M pyvisfile/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-53
(8)

D pyvisfile/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-54
(2)

M quadprog/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-55
(3)

M repex/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-56
(10)

D repex/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-57
(3)

M schema/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-58
(37)

D schema/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-59
(2)

M scs/build.sh
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-60
(5)

D scs/clapack.patch
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-61
(19)

M scs/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-62
(21)

A scs/run_test.py
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-63
(68)

M sh/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-64
(23)

D sh/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-65
(2)

M silo/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-66
(4)

D silo/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-67
(2)

M subprocess32/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-68
(4)

D subprocess32/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-69
(4)

M swig/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-70
(6)

D swig/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-71
(3)

M yank/meta.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-72
(4)

D yank/skip.yaml
https://github.com/omnia-md/conda-recipes/pull/343/files#diff-73
(2)
Patch Links:

https://github.com/omnia-md/conda-recipes/pull/343.patch

https://github.com/omnia-md/conda-recipes/pull/343.diff

—
Reply to this email directly or view it on GitHub
https://github.com/omnia-md/conda-recipes/pull/343.

--

Prof. Dr. Frank Noe
Head of Computational Molecular Biology group
Freie Universitaet Berlin
Phone: (+49) (0)30 838 75354
Web:   research.franknoe.de
Mail:  Arnimallee 6, 14195 Berlin, Germany

Thanks again!


dear lee, where can I download “the annotation result file from ANNOVAR”？the last two sentences of ERROR

wdeMacBook:InterVar-1.0.8 wj$ python Intervar.py -i example/ex1.avinput -o example/myanno --evidence_file=evdience.txt
InterVar
Interpretation of Pathogenic/Benign for variants using python scripts of InterVar.
%prog 0.1.7 20170608
Written by Quan<EMAIL_ADDRESS>InterVar is free for non-commercial use without warranty.
Please contact the authors for commercial use.
Copyright (C) 2016 Wang Genomic Lab
Notice: Your command of InterVar is ['Intervar.py', '-i', 'example/ex1.avinput', '-o', 'example/myanno', '--evidence_file=evdience.txt']
Warning: You provided your own evidence file [ evdience.txt ] for the InterVar.
Warning: Your specified evidence file [ evdience.txt ] is not here,please check the path of your evidence file.
Your analysis will begin without your specified evidence.
INFO: The options are {'pp2_genes': 'intervardb/PP2.genes', 'inputfile': 'example/ex1.avinput', 'exclude_snps': 'intervardb/ext.variants.hg19', 'annotate_variation': './annotate_variation.pl', 'ps4_snps': 'intervardb/PS4.variants.hg19', 'mim_domin': 'intervardb/mim_domin.txt', 'current_version': 'Intervar_20170228', 'bs2_snps': 'intervardb/BS2_hom_het.hg19', 'evidence_file': 'evdience.txt', 'public_dev': 'https://github.com/WGLab/InterVar/releases', 'otherinfo': 'TRUE', 'database_names': 'refGene esp6500siv2_all 1000g201508 avsnp144 dbnsfp30a clinvar_20160302 exac03 dbscsnv11 dbnsfp31a_interpro rmsk ensGene knownGene', 'mim_pheno': 'intervardb/mim_pheno.txt', 'table_annovar': './table_annovar.pl', 'buildver': 'hg19', 'inputfile_type': 'AVinput', 'onetranscript': 'FALSE', 'mim2gene': 'intervardb/mim2gene.txt', 'orpha': 'intervardb/orpha.txt', 'ps1_aa': 'intervardb/PS1.AA.change.patho.hg19', 'mim_adultonset': 'intervardb/mim_adultonset.txt', 'knowngenecanonical': 'intervardb/knownGeneCanonical.txt', 'outfile': 'example/myanno', 'convert2annovar': './convert2annovar.pl', 'database_locat': 'humandb', 'database_intervar': 'intervardb', 'lof_genes': 'intervardb/PVS1.LOF.genes', 'disorder_cutoff': '0.01', 'mim_recessive': 'intervardb/mim_recessive.txt', 'pm1_domain': 'intervardb/PM1_domains_with_benigns', 'mim_orpha': 'intervardb/mim_orpha.txt', 'bp1_genes': 'intervardb/BP1.genes'}
Warning: the folder of humandb is already created!
Warning: The Annovar dataset file of 1000g201508 is not in humandb,begin to download this humandb/hg19_1000g201508.txt ...
perl ./annotate_variation.pl -buildver hg19 -downdb -webfrom annovar 1000g201508 humandb
NOTICE: Web-based checking to see whether ANNOVAR new version is available ... Done
NOTICE: Downloading annotation database http://www.openbioinformatics.org/annovar/download/hg19_1000g201508.txt.gz ... Failed
NOTICE: Downloading annotation database http://www.openbioinformatics.org/annovar/download/hg19_1000g201508.txt.idx.gz ... Failed
WARNING: Some files cannot be downloaded, including http://www.openbioinformatics.org/annovar/download/hg19_1000g201508.txt.gz, http://www.openbioinformatics.org/annovar/download/hg19_1000g201508.txt.idx.gz
perl ./table_annovar.pl example/ex1.avinput humandb -buildver hg19 -remove -out example/myanno -protocol refGene,esp6500siv2_all,1000g2015aug_all,avsnp144,dbnsfp30a,clinvar_20160302,exac03,dbscsnv11,dbnsfp31a_interpro,rmsk,ensGene,knownGene  -operation  g,f,f,f,f,f,f,f,f,r,g,g   -nastring . --otherinfo
Error: the required database file humandb/hg19_ALL.sites.2015_08.txt does not exist.
Warning: The InterVar seems not run correctly, please check your inputs , options and configure file!
ERROR: The InterVar did not find the annotation result file from ANNOVAR!
ERROR: The name of annotation result file should be like example/myanno*.hg19__multianno.txt
Thanks for using InterVar!
Report bugs to<EMAIL_ADDRESS>InterVar homepage: http://wInterVar.wglab.org

what's your annovar version?
It seems the annovar annotation dataset of 1000g2015aug has not been downloaded.

its the latest one, I downloaded here http://www.openbioinformatics.org/annovar/download/0wgxR2rIVP/annovar.latest.tar.gz

I find the latest  intervar doesn't have the following two:
inflating: InterVar-master/example/myanno.hg19_multianno.txt
inflating: InterVar-master/example/myanno.hg19_multianno.txt.grl_p

@pkphcwj you should NEVER share a URL that is protected to public sites. This is absolutely not allowed.

InterVar is available at GitHub that you can download, but ANNOVAR requires a specific registration process. This is different.

ok...I am so so so ...sorry for my fault!I will never do it again.i really need ur help for the use of intervar.

I have redownlaoded the intervar and annovar ，but the myanno.hg19_multianno.txt and  annovar annotation dataset of 1000g2015aug still doesn't exist. whats wrong with it?

myanno.hg19_multianno.txt  is the example output of Annovar,
Make sure your ANNOVAR is updated and also intervar updated , if the ANNOVAR and intervar are all new,
then you should can see :
NOTICE: Downloading annotation database http://www.openbioinformatics.org/annovar/download/hg19_1000g2015aug.zip
not download the  hg19_1000g201508.txt.gz

also update the config,ini file from githup,
and I can see your config,ini file also are outdated.

@quanliustc THANK U SO MUCH! it works now,i added hg19_1000g201508aug in the humandb of intervar and went on!


how to solve this import error?

Thanks for pointing this out. It is due to an accident commit and has been fixed in the latest commit. Please update the codebase and try again.


Button Images are Small

Hello,
So it looks like I've run into an issue. I apologize if this question has been asked

already, but it looks like my button images are showing up very small. Is there a way to increase the size of my button images to fit the action floatyItem ?

Not a bug. Had to alter imageSize in FloatyItem file.


Viewer video lagging

I am using jetson nano with Python3.6.9 and getting video lagging in viewer.py .How should I solve this problem?
Thank You

UPDATE
i found error in logs  here
Version: 0.25.0
[2021-08-31 00:21:24.700] [debug] [Utilities] capture devices 1
[2021-08-31 00:21:24.728] [debug] [Preview] Preview started!

P.S. while I running sample program CPU ran so high 100% percent of my Jetson CPU was eaten .

@omigus you're not alone with that kind of errors see issue #116

@mdisg  I try to implement your solution in #116 But still got problem with image shape resolution , any suggestion to figure it out .


Properties implemented in a class are not determined correctly

TypeScript Version:  1.8.10
Code
    interface IOptions {
        id: string;
    }
    export function test<T>(func: () => IOptions & T) {
        return {
            do() {
                let result = func();
            }
        };
    };

    interface A<T> {
        propA1: '1';
        propA2: C<T>
    }

    interface B {
        propB1: number;
    }

    interface C<T> {
        propC1: () => T;
    }

    let result = test<A<B>>(() => ({
        id: '123',
        propA1: '1',
        propA2: MyClass
    }));

    class MyClass implements C<B> {
        propC1: () => B;
    }

Expected behavior:
I expected that in propA2: MyClass it would be inferred that MyClass implments C<B>.
Actual behavior:
Type '{ id: string; propA1: "1"; propA2: typeof MyClass; }' is not assignable to type 'IOptions & A'.
Type '{ id: string; propA1: "1"; propA2: typeof MyClass; }' is not assignable to type 'A'.
Types of property 'propA2' are incompatible.
Type 'typeof MyClass' is not assignable to type 'C'.
Property 'propC1' is missing in type 'typeof MyClass'.

The expression you'd need to write here
    let result = test<A<B>>(() => ({
        id: '123',
        propA1: '1',
        propA2: MyClass
    }));

Is
    let result = test<A<B>>(() => ({
        id: '123',
        propA1: '1',
        propA2: new MyClass()
    }));

If you meant to provide a constructor function rather than a class instance, you should change your interface to be
    interface A<T> {
        propA1: '1';
        propA2: new() => C<T>
    }

Thanks.
I did not know about new () => C.
That is what I want.
Again, thank you.


Cannot override component such as Input in Item

node, npm, react-native, react and native-base version, expo version if used
Expected behaviour
someProps should be present on Input component
Actual behaviour
No props are forwarded to input
Steps to reproduce should include code snippet and screenshot. Include code snippet in
function MyInput() {
  // do some stuff
  return <Input {...computedProps} />;
}

<Item>
<MyInput ...someProps />
</Item>

Is the bug present in both iOS and Android or in any one of them?
Any other additional info which would help us debug the issue quicker.

present in iOS and Android

@jpolo Can you share the same use case with React Native TextInput?

@jpolo Any updates?

Haven't tried... I think the code in Item.js is pretty explicit :

    let input = [];
    let inputProps = {};
    input = _.remove(childrenArray, item => {
      if (item.type === Input) {
        inputProps = item.props;
        this.inputProps = item.props;
        return item;
      }
    });

I see two options : use react context to register props to the parent or avoid putting heterogeneous elements in children and use one prop per type label, input, etc.
I have tested the second option in my projects and it is the best because it is simple to reproduce compared to context and it is very well typed (in flow at least don't know for ts)

@jpolo Please get me the same use case with React Native TextInput

@jpolo
If what you are trying to do fails for "react-native" TextInput(as you think it will-as mentioned by you previously), then it is an issue of "react-native", and you will notice the exact behaviour if reproduced with "native-base" Input...So, Please check and move forward with the issue if it is a problem exclusive to "native-base"...

@suvenduchhatoi
It is not a React native error but more a Native Base design problem.
I previously quoted the incriminated code in Item.js https://github.com/GeekyAnts/NativeBase/blob/master/src/basic/Item.js#L44
_.remove(childrenArray, item => {
      if (item.type.displayName === "Styled(Input)") { // <=== Here is the problem it will never work on a React Native Text or any other component than a native base input
        inputProps = item.props;
        this.inputProps = item.props;
        return item;
      }
});

@jpolo
As per your expected behaviour-
"someProps should be present on Input component"-
It actually accepts React-Native <TextInput> with props and also, Native-Base <Input> with props...as in the following screenshots:

Closing the issue due to no response for a while...Hope your issue has been resolved.You can reopen the issue if you still feel the issue is exclusive to "native-base"...


espcoredump.py reports KeyError: 'current-thread-id'  (IDFGH-8714)

Answers checklist.

[X] I have read the documentation ESP-IDF Programming Guide and the issue is not addressed there.
[X] I have updated my IDF branch (master or release) to the latest version and checked that the issue is present there.
[X] I have searched the issue tracker for a similar issue and not found a similar issue.

IDF version.
v5.1-dev-1626-g4b6d9c8ad3
Operating System used.
Windows
How did you build your project?
Command line with idf.py
If you are using Windows, please specify command line type.
PowerShell
What is the expected behavior?
I'm not sure what the correct behavior is. I enabled core dump over UART, and expected that idf_monitor would work
What is the actual behavior?
When the Task watchdog is triggered, it prints a backtrace and halts. However, there is an error in idf_monitor:
E (532281) task_wdt: Task watchdog got triggered. The following tasks/users did not reset the watchdog in time:
E (532281) task_wdt:  - IDLE (CPU 1)
E (532281) task_wdt: Tasks currently running:
E (532281) task_wdt: CPU 0: IDLE
E (532281) task_wdt: CPU 1: gdbc fd:56
E (532281) task_wdt: Aborting.
E (532281) task_wdt: Print CPU 1 backtrace

Backtrace: 0x400559dd:0x3fcdae00 |<-CORRUPTED

ELF file SHA256: 764cbc95c5c71bd8

Initiating core dump!
I (12988) esp_core_dump_uart: Press Enter to print core dump to UART...
I (12988) esp_core_dump_uart: Print core dump to uart...
Core dump started (further output muted)
Received  45 kB...
Core dump finished!
espcoredump.py v1.3

Traceback (most recent call last):
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor.py", line 376, in <module>
    main()
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor.py", line 367, in main
    monitor.main_loop()
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor.py", line 162, in main_loop
    self._main_loop()
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor.py", line 268, in _main_loop
    super()._main_loop()
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor.py", line 207, in _main_loop
    self.serial_handler.handle_serial_input(data, self.console_parser, self.coredump,
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor_base\serial_handler.py", line 102, in handle_serial_input
    with coredump.check(line):
  File "C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.2288.0_x64__qbz5n2kfra8p0\lib\contextlib.py", line 135, in __enter__
    return next(self.gen)
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor_base\coredump.py", line 128, in check
    self._check_coredump_trigger_before_print(line)
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor_base\coredump.py", line 106, in _check_coredump_trigger_before_print
    self._process_coredump()
  File "C:\Users\Sean\esp\esp-idf\tools\idf_monitor_base\coredump.py", line 79, in _process_coredump
    coredump.info_corefile()
  File "C:\Users\Sean\.espressif\python_env\idf5.1_py3.10_env\lib\site-packages\esp_coredump\coredump.py", line 367, in info_corefile
    self.print_threads_info(task_info)
  File "C:\Users\Sean\.espressif\python_env\idf5.1_py3.10_env\lib\site-packages\esp_coredump\coredump.py", line 218, in print_threads_info
    threads, _ = self.gdb_esp.get_thread_info()
  File "C:\Users\Sean\.espressif\python_env\idf5.1_py3.10_env\lib\site-packages\esp_coredump\corefile\gdb.py", line 100, in get_thread_info
    current_thread_id = result['current-thread-id']
KeyError: 'current-thread-id'

Steps to reproduce.

Enable core dumps
Have it panic with one thread not issuing the watchdog

Build or installation Logs.
No response
More Information.
No response

@xobs Thank you for informing us about the potential bug. Let us take a quick look at this problem.

@xobs we solved the issue here. The issue arises as a result of an expired timeout while waiting for a response from GDB. An additional check was added while printing the threads info.

For future reference, the fix has been added in esp-coredump==1.4.2. You will upgrade to it automatically if if you rerun install.ps1 or install.bat in your terminal.


chore(deps): bump https://github.com/jenkins-x/jx-cli-base-image.git to 0.0.43

Update jenkins-x/jx-cli-base-image to 0.0.43
Command run was jx step create pr regex --regex (?m)^FROM gcr.io/jenkinsxio/jx-cli-base-image:(?P<version>.*)$ --version 0.0.43 --files Dockerfile --repo https://github.com/jenkins-x/jx-git-operator.git

[APPROVALNOTIFIER] This PR is NOT APPROVED
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This pull-request has been approved by:
To complete the pull request process, please assign rawlingsj
You can assign the PR to them by writing /assign @rawlingsj in a comment when ready.
The full list of commands accepted by this bot can be found here.

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Switch to gcov format

coverage: 91.783%. remained the same when pulling 30632ee7c0a3e52217743b85ad55034e32890a67 on gcov-format into b451cad9c7255117d99c0a3d08998b6757cf9dea on main.

coverage: 91.783%. remained the same when pulling 30632ee7c0a3e52217743b85ad55034e32890a67 on gcov-format into b451cad9c7255117d99c0a3d08998b6757cf9dea on main.


1469 data and code pathway

resolves https://github.com/psu-libraries/scholarsphere/issues/1469

Sorry, @ajkiessl - I had to rebase this again and resolve a conflict, so I need another review


Geolocation data

It would be great to have geolocation as part of the columns

Column for csv?

Doesn't seem like a way to fetch location from Tweets within the search, are you meaning when you specify geolocation as a search you would like that stored in the column?

@haccer not as a search function, but as a new attribute stored in a column

Yes, it would be really useful to store location, even for all requests to be able to create a map with Kibana.

I'm trying to think of a good way to do this.
If I were to add it in, to collect the location data you would need to send a request to every tweet.. which is a lot of requests.

I didn't think I was going to be able to add this since Twitter has removed the location a person's at from appearing in the Tweet; so we're getting the location data from their Twitter profile... which is sometimes not as accurate, but it's better than nothing. It's a bit slower than a regular search, but same speed as getting a person's favorites is.


chore(main): release 1.1.3

:robot: I have created a release beep boop
1.1.3 (2023-10-21)
Bug Fixes

add relabeling for instance to node name (#5) (50c23c2)
update grafana dashboard to be compatible with grafana 11+ (#7) (2a905e4)

This PR was generated with Release Please. See documentation.

:robot: Release is at https://github.com/mikesmitty/nvme_exporter/releases/tag/v1.1.3 :sunflower:


and what is the order when there is more than one project?

From this explanation, it's not clear to me if the order is per solution or per project. So I don't know whether (A) all pre-build in a solution execute before compiling any project and all post-build after compiling all projects, or (B) each project is compiled following the sequence above, so a pre-build of one project comes after the post-build of its dependencies

Document Details
⚠ Do not edit this section. It is required for docs.microsoft.com ➟ GitHub issue linking.

ID: 8e0035ba-394d-8b59-05c8-442beeb0da88
Version Independent ID: fbcf56d2-541b-97bc-69f9-88962e08c6fe
Content: Understanding Custom Build Steps and Build Events
Content Source: docs/build/understanding-custom-build-steps-and-build-events.md
Product: visual-cpp
Technology: cpp-tools
GitHub Login: @corob-msft
Microsoft Alias: corob

@pablocar80 thanks for the feedback. Pre-build and post-build events occur at the beginning and end of each project compilation. So the answer is (B). I have clarified the documentation.


go 1.12 breaking changes

As detailed here: https://golang.org/doc/go1.12#syscall/js
The changes made to syscall/js have now broken certain parts of the library.
I'd like to know wether or not this is something you are working on.
If not, I'm happy to start looking into it and helping out where able.

Sorry for the late reply. The library was updated to support Go 1.12 recently, and CI seems to pass as well. Can you please attach a specific error you see?

Hi @dennwc
your recent update has fixed the issues I was having, so issue closed from my point of view!
Thanks for your great work.


Trying to run stage 6

keshav@dev:~/Downloads/JWST_Sim/NIRSpec/Stage6$ python3 run_eureka.py
2022-04-06 00:43:05,650 - stpipe - INFO - Loading KWallet
2022-04-06 00:43:05,653 - stpipe - INFO - Loading SecretService
2022-04-06 00:43:05,657 - stpipe - INFO - Loading Windows
2022-04-06 00:43:05,658 - stpipe - INFO - Loading chainer
2022-04-06 00:43:05,658 - stpipe - INFO - Loading macOS
Starting Stage 6: Light Curve Fitting
WARNING: There are multiple metadata save files in your inputdir:
"/home/keshav/Downloads/JWST_Sim/NIRSpec/Stage5/"
Using the metadata file:
/home/keshav/Downloads/JWST_Sim/NIRSpec/Stage5/S5_2022-04-05_wasp39b_ap6_bg7_run1/S5_wasp39b_Meta_Save.dat
and will consider aperture ranges listed there. If this metadata file is not a part
of the run you intended, please provide a more precise folder for the metadata file.
Input directory: /home/keshav/Downloads/JWST_Sim/NIRSpec/Stage5/S5_2022-04-05_wasp39b_ap6_bg7_run1/
Output directory: /home/keshav/Downloads/JWST_Sim/NIRSpec/Stage6/S6_2022-04-06_wasp39b_ap6_bg7_run3/
Copying S6 control file
Traceback (most recent call last):
File "run_eureka.py", line 28, in
s6_meta = s6.plot_spectra(eventlabel, ecf_path=ecf_path)
File "/home/keshav/.local/lib/python3.8/site-packages/eureka/S6_planet_spectra/s6_spectra.py", line 143, in plot_spectra
median, err = parse_s5_saves(meta, fit_methods, y_param, f'ch{channel}')
File "/home/keshav/.local/lib/python3.8/site-packages/eureka/S6_planet_spectra/s6_spectra.py", line 261, in parse_s5_saves
fitted_values = pd.read_csv(meta.inputdir+fname, escapechar='#', skipinitialspace=True)
File "/home/keshav/.local/lib/python3.8/site-packages/pandas/util/_decorators.py", line 311, in wrapper
return func(*args, **kwargs)
File "/home/keshav/.local/lib/python3.8/site-packages/pandas/io/parsers/readers.py", line 680, in read_csv
return _read(filepath_or_buffer, kwds)
File "/home/keshav/.local/lib/python3.8/site-packages/pandas/io/parsers/readers.py", line 575, in _read
parser = TextFileReader(filepath_or_buffer, **kwds)
File "/home/keshav/.local/lib/python3.8/site-packages/pandas/io/parsers/readers.py", line 933, in init
self._engine = self._make_engine(f, self.engine)
File "/home/keshav/.local/lib/python3.8/site-packages/pandas/io/parsers/readers.py", line 1217, in _make_engine
self.handles = get_handle(  # type: ignore[call-overload]
File "/home/keshav/.local/lib/python3.8/site-packages/pandas/io/common.py", line 789, in get_handle
handle = open(
FileNotFoundError: [Errno 2] No such file or directory: '/home/keshav/Downloads/JWST_Sim/NIRSpec/Stage5/S5_2022-04-05_wasp39b_ap6_bg7_run1/S5_dynesty_fitparams_ch5.csv'

Can you tell me what are all the filenames in the folder /home/keshav/Downloads/JWST_Sim/NIRSpec/Stage5/S5_2022-04-05_wasp39b_ap6_bg7_run1/
Can you also copy-paste the contents of the Stage 5 ECF that was copied to that folder?

keshav@dev:~/Downloads/JWST_Sim/NIRSpec/Stage5/S5_2022-04-05_wasp39b_ap6_bg7_run1$ ls
figs                          S5_dynesty_samples_ch4.h5
S5_dynesty_fitparams_ch0.csv  S5_fit_par_template.ecf
S5_dynesty_fitparams_ch1.csv  S5_wasp39b_ap6_bg7_Table_Save_ch0.txt
S5_dynesty_fitparams_ch2.csv  S5_wasp39b_ap6_bg7_Table_Save_ch1.txt
S5_dynesty_fitparams_ch3.csv  S5_wasp39b_ap6_bg7_Table_Save_ch2.txt
S5_dynesty_fitparams_ch4.csv  S5_wasp39b_ap6_bg7_Table_Save_ch3.txt
S5_dynesty_samples_ch0.h5     S5_wasp39b_ap6_bg7_Table_Save_ch4.txt
S5_dynesty_samples_ch1.h5     S5_wasp39b.ecf
S5_dynesty_samples_ch2.h5     S5_wasp39b.log
S5_dynesty_samples_ch3.h5     S5_wasp39b_Meta_Save.dat

#Name        Value         Free?          PriorPar1    PriorPar2    PriorType
#PriorType can be U (Uniform), LU (Log Uniform), or N (Normal). If U/LU, PriorPar1 and PriorPar2 represent upper and lower limits of the parameter/log(the parameter).           PriorPar1    PriorPar2    PriorType #PriorType can be U (Uniform), LU (Log Uniform), or N (Normal). If U/LU, PriorPar1 and PriorPar2 represent upper and lower limits of the parameter/log(the parameter).  Control File for Stage 5: Lightcurve Fitting
ncpu            1 # The number of CPU threads to use when running emcee or dynesty in parallel
allapers        True                    # Run S5 on all of the apertures considered in S4? Otherwise will use newest output in the inputdir
rescale_err     False                   # Rescale uncertainties to have reduced chi-squared of unity
fit_par         ./S5_fit_par_template.ecf   # What fitting ecf do you want to use?
verbose         True                    # If True, more details will be printed about steps
fit_method      [dynesty]               #options are: lsq, emcee, dynesty (can list multiple types separated by commas)
run_myfuncs     [batman_tr,polynomial]  #options are: batman_tr, batman_ecl, sinusoid_pc, expramp, and polynomial (can list multiple types separated by commas)
Limb darkening controls (not yet implemented)
#fix_ld          False #use limb darkening file?
#ld_file         /path/to/limbdarkening/ld_outputfile.txt  #location of limb darkening file
#lsq
lsq_method      'Nelder-Mead' # The scipy.optimize.minimize optimization method to use
lsq_tol         1e-6    # The tolerance for the scipy.optimize.minimize optimization method
#mcmc
old_chain       None    # Output folder relative to topdir that contains an old emcee chain to resume where you left off (set to None to start from scratch)
lsq_first       True    # Initialize with an initial lsq call (can help shorten burn-in, but turn off if lsq fails). Only used if old_chain is None
run_nsteps      4000
run_nwalkers    50
run_nburn       2000
#dynesty
run_nlive       1024    # Must be > ndim * (ndim + 1) // 2
run_bound       'multi'
run_sample      'unif'
run_tol         0.1
Plotting controls
interp          False   # Should astrophysical model be interpolated (useful for uneven sampling like that from HST)
Diagnostics
isplots_S5      5       # Generate few (1), some (3), or many (5) figures (Options: 1 - 5)
testing_S5      False   # Boolean, set True to only use the first spectral channel
testing_model   False   # Boolean, set True to only inject a model source of systematics
hide_plots      False   # If True, plots will automatically be closed rather than popping up
Project directory
topdir                  /home/keshav/Downloads/JWST_Sim/NIRSpec
Directories relative to project dir
inputdir		Stage4/S4_2022-04-01_wasp39b_ap6_bg7_run3/
outputdir               /Stage5

Can you copy-paste the contents of the ECF that was copied to the folder /home/keshav/Downloads/JWST_Sim/NIRSpec/Stage4/S4_2022-04-01_wasp39b_ap6_bg7_run3/
Also, if you downloaded Eureka with git can you tell me the output of git log -1

Or rather copy-paste the filenames in that folder like you did before

keshav@dev:~/Downloads/JWST_Sim/NIRSpec/Stage4/S4_2022-04-01_wasp39b_ap6_bg7_run3$ ls
figs                               S4_wasp39b.ecf  S4_wasp39b_Meta_Save.dat
S4_wasp39b_ap6_bg7_Table_Save.txt  S4_wasp39b.log

keshav@dev:~/Downloads/JWST_Sim/NIRSpec/Stage6$ git log -1
fatal: not a git repository (or any of the parent directories): .git

Can you copy-paste the contents of the ECF file /home/keshav/Downloads/JWST_Sim/NIRSpec/Stage4/S4_2022-04-01_wasp39b_ap6_bg7_run3/S4_wasp39b.ecf
And what instructions did you follow to install Eureka? I'm trying to figure out how old the code version is that you're using

Eureka! Control File for Stage 4: Generate Lightcurves
Number of spectroscopic channels spread evenly over given wavelength range
nspecchan       20          # Number of spectroscopic channels
wave_min        1.0         # Minimum wavelength. Set to None to use the shortest extracted wavelength from Stage 3.
wave_max        5.0         # Maximum wavelength. Set to None to use the longest extracted wavelength from Stage 3.
allapers        True        # Run S4 on all of the apertures considered in S3? Otherwise will use newest output in the inputdir
Parameters for drift correction of 1D spectra
correctDrift    False   # Set True to correct drift/jitter in 1D spectra (not recommended for simulated data)
drift_preclip   0       # Ignore first drift_preclip points of spectrum
drift_postclip  100     # Ignore last drift_postclip points of spectrum, None = no clipping
drift_range     11      # Trim spectra by +/-X pixels to compute valid region of cross correlation
drift_hw        5       # Half-width in pixels used when fitting Gaussian, must be smaller than drift_range
drift_iref      -1      # Index of reference spectrum used for cross correlation, -1 = last spectrum
sub_mean        True    # Set True to subtract spectrum mean during cross correlation
sub_continuum   True    # Set True to subtract the continuum from the spectra using a highpass filter
highpassWidth   10      # The integer width of the highpass filter when subtracting the continuum
Parameters for sigma clipping
sigma_clip      False   # Whether or not sigma clipping should be performed on the 1D time series
sigma           10      # The number of sigmas a point must be from the rolling median to be considered an outlier
box_width       10      # The width of the box-car filter (used to calculated the rolling median) in units of number of data points
maxiters        5       # The number of iterations of sigma clipping that should be performed.
fill_value      mask    # Either the string 'mask' to mask the outlier values (recommended), 'boxcar' to replace data with the mean from the box-car filter, or a constant float-type fill value.
Diagnostics
isplots_S4      3       # Generate few (1), some (3), or many (5) figures (Options: 1 - 5)
hide_plots      False   # If True, plots will automatically be closed rather than popping up
verbose         False   # If True, more details will be printed about steps
Project directory
topdir          /home/User
Project directory
topdir                  /home/keshav/Downloads/JWST_Sim/NIRSpec
Directories relative to project dir
inputdir		//home/keshav/Downloads/JWST_Sim/NIRSpec/Stage3/S3_2022-04-01_wasp39b_ap6_bg7_run2/
outputdir               /Stage4

I had installed it downloading a zip from the github, around a couple weeks or so

Alright, well it seems certain to me that your Stage 5 run was interrupted as it should contain 20 spectral channels but only has 5, and Stage 6 knows that it should have 20 and tries to find them all and breaks when it hits ch5. Either the Stage 5 run crashed or you interrupted it. You can see how far it got by reading the contents of /home/keshav/Downloads/JWST_Sim/NIRSpec/Stage5/S5_2022-04-05_wasp39b_ap6_bg7_run1/S5_wasp39b.log
Either way, this is the expected behaviour given an incomplete Stage 5 run, so I'll now close this issue


Unreal integration changes

Fix static analysis warning about uninitialized memory in Diagnostics::AppendEvent
Fix unreachable code warning
Fix lifetime issue with lambdas used in NetworkService and EventLogger

Closed internally by fc2dda459c5d8d5f3fc451d21ffd4254178558ca


pettiness re matthews.ci

prepare/metrics/matthews_correlation.py contains a test case of three simple instances.
the mcc (Mathews Correlation Coefficient) of this 3 pair-item long sequence is: 0.5, as rightfully expected in the global_target in prepare/metrics/matthews_correlation.py.
The targeted global ci, however, is rather disappointing: for 3-item long sequence, there are 27 different resamples with replacement. All 27 are equi-probable, by definition of selection with replacement.
6 out of these 27 resamples have mcc score == 1.0.   see attached notebook.
ci_high reports the 97.5 percentile. It is expected, then, to hit into the 1.0 scores. Seeing targeted  "matthews_correlation_ci_high": 0.5,   is disappointing.
The cause here is the small number, 3, of resamples done.
So I suggest to enlarge the number of resamples done to 30 (the sequences are so short, that no big deal), or write a comment in prepare/metrics/matthews_correlation.py  explaining that it serves mostly as a SHA code,
ci_for_matthews.pdf

leave this pettiness aside for now. we just note that there is an issue.


Expo install guide

Current Behavior
Guide instructs with npm, creating a package-lock.json, but the next step asks you to use Yarn, resulting in a new yarn.lock
Expected Behavior
Instructions to use one or the other
Tamagui Version
https://tamagui.dev/docs/guides/expo

Reproduction
Follow guide on https://tamagui.dev/docs/guides/expo

System Info
No response

Not true, npm create tamagui uses yarn to install.


curl: disable LDAP on linux

This was the fix to #127, added in 65d490d54b8c4df811d0f23f197a262e8edfb5b6 but it must have been removed at some point.  For me, at least, it's still necessary; I get the same error (xubuntu 14.04.2).
HOMEBREW_VERSION: 0.9.5
ORIGIN: https://github.com/Homebrew/linuxbrew.git
HEAD: aee223b4ff6ce184873283d19c9de3e83c54bf9c
Last commit: 13 minutes ago
HOMEBREW_PREFIX: /home/alix/.linuxbrew
HOMEBREW_CELLAR: /home/alix/.linuxbrew/Cellar
CPU: dual-core 64-bit 6
OS X: 0-x86_64
Xcode: N/A
CLT: N/A
Clang: N/A
X11: N/A
System Ruby: 1.9.3-p484 => /usr/bin/ruby1.9.1
Perl: /usr/bin/perl
Python: /home/alix/.linuxbrew/bin/python => /home/alix/.linuxbrew/Cellar/python/2.7.9/bin/python2.7
Ruby: /usr/bin/ruby => /usr/bin/ruby1.9.1
Java: N/A

Could you make this an option instead, --without-ldap?

Sure!  Should it be recommended, or just a regular option? --with-ldap or --without-ldap?

Just a regular option.
option "without-ldap", "Build without LDAP support"
…
args << "--disable-ldap" if build.without? "ldap"

Should the option just say "can cause build errors"? There's no question anymore of ever merging linuxbrew and homebrew, is there?

I haven't run into the error that you're seeing. I'd prefer to describe the option with exactly what it does. If you're having conflicts with system libraries, consider a Standalone Installation of Linuxbrew, which does not use the system libraries at all.

There's no question anymore of ever merging linuxbrew and homebrew, is there?

Not any time soon. I would like to merge them, but the upstream Homebrew developers are not interested. The current fork/merge system is working pretty well though. I merge the Homebrew changes into Linuxbrew once per week.

OK, removed the parenthetical bit.

Can you send this patch upstream to Homebrew/homebrew, Alex?

Yeah. Opened Homebrew/homebrew#39012.

Thanks. Let's see if they take it.


Migrate iOS app to remove EMBEDDED_CONTENT_CONTAINS_SWIFT and ALWAYS EMBED_SWIFT_STANDARD_LIBRARIES build settings

Xcode is warning these build settings should be removed. Remove it from the create template, and remove it during an app migration.

Hmm, never mind, this doesn't seem to be in the create template.


webpackv5 is not supported ESM bundle?

Feature request

Provide unified packaging support for esm and umd

What is the expected behavior?
Provide unified packaging support for esm and umd
What is motivation or use case for adding/changing the behavior?
How should this be implemented in your opinion?
Are you willing to work on this yourself?
yes

We support ESM and UMD, please fill out all fields in issue template and I wil, reopen, thank you


support Google Shared Drives for backups

Important notices
Before you add a new report, we ask you kindly to acknowledge the following:

[x] I have read the contributing guide lines at https://github.com/opnsense/core/blob/master/CONTRIBUTING.md
[x] I am convinced that my issue is new after having checked both open and closed issues at https://github.com/opnsense/core/issues?q=is%3Aissue

Is your feature request related to a problem? Please describe.
Using a Google Shared Drive (such as a Google Workspace Shared Drive in a company) for the System Configuration backup doesn't work.
Describe the solution you like
The Google API requires to add the supportsAllDrives=true to the API calls.
https://developers.google.com/drive/api/guides/enable-shareddrives
Which is not set in the current OPNsense code.
See here for instance: https://github.com/opnsense/core/blob/22f939bb8df2d116a5a709a5f952cb59e5c7a778/src/opnsense/mvc/app/library/Google/API/Drive.php#L100
maybe something along those lines? (similar on each call)
return $this->service->files->listFiles(array('q' => $query, 'supportsAllDrives' => true ));

https://github.com/opnsense/core/pull/7009

@mimizone can you try https://github.com/opnsense/core/commit/29215763026b7a1f4fa33a6d2cdd9c3fade8bed2 ? your commit had a typo, fixed some small styling issues while there as well. As far as I could find there are no downsides to always supplying supportsAllDrives, my gdrive still works after this patch.

works for me on 23.7.7_1-amd64


[Bug] symbolType.indexOf is not a function

Version
5.x.x
Link to Minimal Reproduction
Official website https://echarts.apache.org/examples/en/editor.html?c=radar-custom&version=5.0.0
codesandbox https://codesandbox.io/p/sandbox/customized-radar-chart-forked-4dxjk2
Steps to Reproduce

Current Behavior
symbol and  symbolSize Not support function
Expected Behavior
symbol and  symbolSize should support function according to the documentation

Environment
- OS:
- Browser:
- Framework:

Any additional comments?
No response

Definitely a bug.
I will work on this.


Address Manager should be responsible for create/update self peer record

The AddressManager should be responsible both for creating and updating the self peer record over time, as listen addresses or announce/nonAnnounce  are updated.
This functionality currently lives on the TransportManager, which should only be responsible for the listeningAddresses.
The AddressManager should also be responsible for tracking the peer's observed addresses.
References:

https://github.com/libp2p/js-libp2p/pull/748

Closing as this has been implemented


Error on api-version 2022-05-13 for Azure Confidential Ledger

I want to query my Azure Confidential Ledger, while I encountered with the following error:
raise HttpResponseError(response=response)
azure.core.exceptions.HttpResponseError: (QueryParameterError) Parsed api-version 2022-05-13 is not available. Please use one of the following versions: 2022-04-20-preview,0.1-preview
Code: QueryParameterError
Message: Parsed api-version 2022-05-13 is not available. Please use one of the following versions: 2022-04-20-preview,0.1-preview

How should I change the api-version from "2022-05-13" to "2022-04-20-preview"?
Thanks,
Document Details
⚠ Do not edit this section. It is required for learn.microsoft.com ➟ GitHub issue linking.

ID: 756d7e9d-e984-8189-75e4-0e08b26c114a
Version Independent ID: de71656d-4c71-cf7f-632e-695c018c9644
Content: Microsoft Azure confidential ledger overview
Content Source: articles/confidential-ledger/overview.md
Service: confidential-ledger
GitHub Login: @msmbaldwin
Microsoft Alias: mbaldwin

@AminAvan
Thanks for your feedback! I've assigned this issue to the author who will investigate and update as appropriate.
@msmbaldwin
Could you Please review and add comments on this and update as appropriate.

Thanks,
Any update?

Would you please update me?
The Azure Confidential Ledger is a new service; unfortunately, its document has many issues! Even, it does not provide a sample on how we can get query from "Azure Confidential Ledger"!
Thanks!

#please-close


MM-27208 Add E2E test for MM-T1680

An E2E test and some infrastructure changes for MM-T1680. I'd provide more details on what is tested, but the test conditions are hard to state concisely.
I posted about this in the QA channel, but I've split this off into its own spec file since we're going to be adding a ton of new tests around archived channels. This'll let us run the tests in smaller batches, and it'll also stop Guillermo and I from constantly running into conflicts since we're adding tests for the same area of the codebase.
Ticket Link
https://mattermost.atlassian.net/browse/MM-27208

I've added a few more checks that were part of MM-T1681 because that test is just a subset of MM-T1680


什么时候发下一个release?

What problem does this feature solve?
什么时候发下一个release?
What does the proposed API look like?
什么时候发下一个release?

目前正在测试中，预计一周进入 Apache 发版流程，顺利的话大概3-4周后发布。


Cross-SlotMap usage of Key tracking issue

Currently there is no compile-time or run-time protection of using a Key from one SlotMap on another. There is no unsafe behavior if this occurs, but it might be worth catching this error somehow anyway.
Some approaches were suggested.

Changing Key to Key<T>, of the type of the slot map. This offers a little protection, but not much - you can still use keys between slot maps storing the same type of value. If you take into account that values are also actually used after retrieval, with typechecking, any undetected errors of using a key on the wrong slot map probably already stored values of the same type.

Storing a unique id per slot map inside it and in the key as well and checking for equality when used. Quite expensive, so possibly only when debug mode is enabled. Arises questions of how such an unique id should be generated, and how the error should be reported. E.g. should sm1.get(k2) return None or panic? (Probably panic).

Starting the version field of each slot map on a random location to reduce the chance of a valid result when crossing keys. Not a fan of this, as it might actually make the problem harder and more spurious to detect, while still leaving the possibility of the error.

Adding a marker type M to both SlotMap<T, M=()> and Key<M=()> that can be used to distinguish a slot map from any other if the user desires with their own new type. Stops all errors and is elegant, but has two issues. Users have to make their own newtypes to get this protection and it blows up code size (until this is fixed https://github.com/rust-lang/rust/pull/48139).

Add a key type for the slot map, such that SlotMap<T, K=Key> where K: Copy + From<Key> + Into<Key>. This allows people to make key newtypes that can't be mixed/matched. Very similar to number 4.

I'm currently leaning towards #4. A possible remedy for the blowup in code size is to recommend users to do the following:
#[cfg(not(debug_assertions))]
struct EntitiesMarker;

#[cfg(debug_assertions)]
type EntitiesMarker = ();

So that you get the added type checking in debug mode but no code size blowup in release mode. Possibly providing a macro for this as well.

Never mind the code blowing up in size, that appears to be fixed: https://github.com/rust-lang/rust/pull/49479.

A fix of type 4 would be great. I just had to fix a trivial error that typed keys would have prevented.
Basically I had a function that took two keys as parameters. I passed them in as keyA keyB but wrote the method as keyB keyA, couldn’t figure out what was going wrong for a while.
That said it’s not a major major problem and I know to double check these things going forward.

I chose to go with option 5, and a first implementation is done in https://github.com/orlp/slotmap/commit/aa0a6760104f77f5767fde5225e730a979ba1b5c (you can see how much work this has been).
This breaks most code, but the fixes are very simple, and make people more aware of their key type, which is good.
Marker types felt just a bit too... sketchy. They're kinda abusing the type system, and break in non-obvious ways (e.g. derives).

Fixed with release 0.3.0.


I want to ask about the output of your CLTR model

i see outputs['pred_logits'] which shape are (batch_size, num_queries, num_classes) but outputs['pred_points'] shape is (batch_size,  num_queries, 3). What is that 3 stands for?. And does num_classes = 2 which is person head and background ?

# the `num_classes` naming here is somewhat misleading.
# it indeed corresponds to `max_obj_id + 1`, where max_obj_id
# is the maximum id for a class in your dataset. For example,
# COCO has a max_obj_id of 90, so we pass `num_classes` to be 91.
# As another example, for a dataset that has a single class with id 1,
# you should pass `num_classes` to be 2 (max_obj_id + 1).
# For more details on this, check the following discussion
# https://github.com/facebookresearch/detr/issues/108#issuecomment-650269223

The third number means the KNN distance


Adds encryption_proxy example

Hi,
This PR adds an encryption proxy example using current SAM version and it outputs both API Gateway entrypoints (RestApi) via Cloudformation.
All details can be found in the README file - Please let me know if there are any questions.
Thanks

@sanathkr thanks for all comments - Just made changes on what was required and commented on those that can't as it breaks the example.
Let me know if you need anything else

Currently working on simplifying the Exception Handling as there are some edge cases on TypeError too found in my tests today.

@sanathkr Implemented your last comment on raising exceptions as it's now simplified and it also caught 2 bad inputs I wasn't handling before.
Let me know what else is required to push this forward.

Thanks for adding this example!

Hello! This example is incomplete. There is no AWS::Serverless::Api defined in the template, although it is referenced.

Hi Preston,
Would you mind expand on that?
API Gateway is implicitly defined under Events, and its implicit resource
explicitly references in Outputs section.
If you run a describe Stack after deploying a SAM template you’d be able to
see why this works.
Happy to clarify any further thoughts
On Sun, 22 Oct 2017 at 06:54, Preston Tamkin<EMAIL_ADDRESS>wrote:

Hello! This example is incomplete. There is no AWS::Serverless::Api
defined in the template, although it is referenced.
—
You are receiving this because you authored the thread.
Reply to this email directly, view it on GitHub
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.

Hi,
Sorry yes my apology! I have been using SAM for quite some time and was not aware that the API Gateway would be created implicitly.


Default category can't be removed

I have sorted out my novels among 4 categories in the library. But there's a 5th category, which I have no use of, 'default' category. It can't be deleted, nor can I change its name to replace it with others. It stays there along with other categories, and this irks me a lot. Even in the library section in the settings, it says the number of categories are 5, but only 4 can be shown, that can be edited or sorted in an order.
Expected behavior
It would be helpful if we have the option to remove the default category.
Actual behavior

LNReader version
1.1.15
Android version
Android 10
Device
Honor 8x
Other details
No response
Acknowledgements

[X] I have searched the existing issues and this is a new ticket, NOT a duplicate or related to another open or closed issue.
[X] I have written a short but informative title.
[X] If this is an issue with a source, I should be opening an issue in the sources repository.
[X] I have updated the app to version 1.1.15.
[X] I will fill out all of the requested information in this form.

Hey, I can see that the default category has been removed. Thanks for that.
There thing is now i can't see any novel entries in my library. It says, "Your library is empty. Add series to your library from browse." However, somehow I can update (refresh) those invisible entries. In other words, those entries are there in the library, they are updated on daily basis, can be seen in the updates section, but it's not showing on the library screen. I tried backing up from the previous saved file, and still not working.

@EdelReid The default category can't be removed, however it won't be displayed if there are no novels inside. If you select another category as default category it also won't appear again when you add a new novel.

Thanks got the reply. I got the result, the default category can't be
viewed from the library now.
I remade one of the categories which I believed the 'default' category,
literally was showing the same Novels. So now I made another category to be
default, and now I can't see the literal 'default' category.
In doing so, and even now, I encountered another issue. Whenever I try to
press and hold the 'add to library' in the 'global search' and tick mark
one of the categories, the novel doesn't appear in the library in that
category. So overall now press and hold doesn't work as intended in the
global search. Simply clicking 'add to library' adds the novel to the
category which I have set to default. So once the novel has been added to
the default category, after going to that particular novel in the library,
i can then press and hold and transfer it between categories. Hope this
helps.
On Sun, 7 May, 2023, 18:47 Patrick Loser, @.***> wrote:

@EdelReid https://github.com/EdelReid The default category can't be
removed, however it won't be displayed if there are no novels inside. If
you select another category as default category it also won't appear again
when you add a new novel.
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Curves have no effect?

Running flutter 2.0.1
Steps to reproduce:

Create new Flutter project
Copy and paste example from the docs into main.dart
Add a curve to one of the transitions:

    ElevatedButton(
              child: Text('Left To Right Transition Second Page'),
              onPressed: () {
                Navigator.push(
                  context,
                  PageTransition(
                    type: PageTransitionType.leftToRight,
                    curve: Curves.easeInCubic,
                    duration: Duration(milliseconds: 500),
                    child: SecondPage(),
                  ),
                );
              },
            ),

Expected behaviour:
Page transition adapts to the curve provided
Actual behaviour:
No curve or effect at all is applied, the page just slides in
I thought I was missing something (and I probably am!) but given that this is a direct clone of the docs example, was wondering if I can ask for a little help? Thanks,

Exploring the examples a bit more, it seems like the curves don't take effect if using PageTransitionType.leftToRight but they do if using PageTransitionType.leftToRightJoined - is that right?

It seems like this issue isn't resolved. Using PageTransitionType.leftToRight or PageTransitionType.rightToLeft causes the curve property to be ignored. Setting it to PageTransitionType.leftToRightJoined or PageTransitionType.rightToLeftJoined fixes this and the curve is once again respected.


config file to listen on all interface [<IP_ADDRESS>]

I just used your module, thanks for making one.
What I noticed, that after installing wildfly listen on localhost i.e [<IP_ADDRESS>] rather then [<IP_ADDRESS>]
The config variable
class { '::wildfly' :
    version           => $version,
    install_source    => "http://download.jboss.org/wildfly/$version.Final/wildfly-$version.Final.tar.gz",
    java_home         => "/opt/jdk-$version",
    group             => 'wildfly',
    user              => 'wildfly',
    dirname           => "/opt/wildfly",
    mode              => "standalone",
    config            => "standalone-full.xml",
}

This is class which is calling a config variable
init.pp
  $config            = $wildfly::params::config, #jboss_config

Which goes to params.pp and has a value "standalone-full.xml"
params.pp
  $config            = 'standalone-full.xml'

This the one of exec which looks for "wildfly::config" which has value standalone-full.xml
exec { 'replace management bind':
    command => "sed -i -e's/jboss.bind.address.management:<IP_ADDRESS>/jboss.bind.address.management:${wildfly::mgmt_bind}/g' ${wildfly::dirname}/standalone/configuration/${wildfly::config}",
    path    => '/bin:/sbin:/usr/bin:/usr/sbin',
    onlyif  => "grep 'jboss.bind.address.management:<IP_ADDRESS>' ${wildfly::dirname}/standalone/configuration/${wildfly::config}",
  }

To me it looks like we are running sed on the wrong file here. or just i'm understanding the whole thing?
I manually edited the standalone.xml and changed localhost to [<IP_ADDRESS>] and it started listening on all the interface.

ok, thanks
interesting, are you using the latest version of forge or github?
when you provide your own it should override the one from params
also these are the defaults.
mode             => "standalone",
config            => "standalone-full.xml",

Did it change something else.
So I think the onlyif statement didn't work. Can you run it again and in debug mode. Let's see what it does.
in this box https://github.com/biemond/vagrant-fedora20-puppet ( with the latest version of github , not the forge)  I know it works with this config
  class { 'wildfly':
    version           => '8.2.0',
    install_source    => 'http://download.jboss.org/wildfly/8.2.0.Final/wildfly-8.2.0.Final.tar.gz',
    java_home         => '/opt/jdk-8',
    dirname           => '/opt/wildfly',
    mode              => 'standalone',
    config            => 'standalone-full-ha.xml',
    users_mgmt        => { 'wildfly' => { username => 'wildfly', password => 'wildfly'}},
  }

Thanks

Ah.. gotcha.. I installed it from forge,
Here is the updated one on github.
    command => "sed -i -e's/\\-Xms.*m \\-Xmx.*m \\-XX:MaxPermSize=.*m/\\-Xms${wildfly::java_xms} \\-Xmx${wildfly::java_xmx} \\-XX:MaxPermSize=${wildfly::java_maxpermsize}/g' ${wildfly::dirname}/bin/${wildfly::mode}.conf",

Here you have changed the wildfly::config to wildfly::mode, which is what I was missing here. No issue, I will get a latest from github.
Thanks for a quick reply.